PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5nl7A_

Fold library id	PDB Header	Molecule	Title
c5nl7A_	2.48	PDB header: structural protein	Chain: A: PDB Molecule: calponin homology domain protein putative;

Links to external resources
Added to library: Sat May 19 08:28:01 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A D S E L V A Q W E K V Q I K T F T K W V N M H L A K K G R K I N D V T T D F K N G V E L C A L L E I I G E T T I K C V T N P K M R I Q M T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
S
T T T S T
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E N L D K A L R F I Q S R D V K L T G I G P T D I V D G N V K L T L G L V W T L I L R F A I S E L S A E G L S A K Q G L L L W C Q K K C E P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T
T S G G G
S S S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y P V K V E N F S E S F K D G K V F C A L I H R H R P D L L D W E T V G E D D R A N L E K A F D V A E K E L G I P K L L D V D D I V N M P R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S G G G T T S
T T S
G G G
S
T
S
S S S

. . . . . . . . . 220 . . . . . . . . . 230

Sequence P D E R S V M T Y V A A L Y K V F S S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	D	S	E	L	V	A	Q	W	E	K	V	Q	I	K	T	F	T	K	W	V	N	M	H	L	A	K	K	G	R	K	I	N	D	V	T	T	D	F	K	N	G	V	E	L	C	A	L	L	E	I	I	G	E	T	T	I	K	C	V	T	N	P	K	M	R	I	Q	M	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										G	G	G	T				S						T	T	T	S												T							S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	N	L	D	K	A	L	R	F	I	Q	S	R	D	V	K	L	T	G	I	G	P	T	D	I	V	D	G	N	V	K	L	T	L	G	L	V	W	T	L	I	L	R	F	A	I	S	E	L	S	A	E	G	L	S	A	K	Q	G	L	L	L	W	C	Q	K	K	C	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T				S	S								T	T																	T	S	G	G	G			S	S	S														T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	P	V	K	V	E	N	F	S	E	S	F	K	D	G	K	V	F	C	A	L	I	H	R	H	R	P	D	L	L	D	W	E	T	V	G	E	D	D	R	A	N	L	E	K	A	F	D	V	A	E	K	E	L	G	I	P	K	L	L	D	V	D	D	I	V	N	M	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S						S	S	G	G	G	T	T	S												T	T	S			G	G	G			S																	T						S								S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Sequence	P	D	E	R	S	V	M	T	Y	V	A	A	L	Y	K	V	F	S	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)