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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5nilG_

Fold library idPDB HeaderMoleculeTitle
c5nilG_5.30PDB header: transport proteinChain: G: PDB Molecule: macrolide export protein maca;


Added to library: Sat May 27 09:31:35 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQI
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Known secondary structure (DSSP)








B




S


SS





TT



TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence KEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQ
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Known secondary structure (DSSP) TT

STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQ
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Known secondary structure (DSSP)
SS


B



S
TT




SSS




TT
TTSTTS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPL
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Known secondary structure (DSSP)
TTTSS





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TT


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SBT
 .........290.........300.........310.........320.........330.........340
Sequence SALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
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Known secondary structure (DSSP) TT



TTT



TTS


B


B
SSSBSS
TT
SSS

TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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