Fold library entry viewer: c5nikK_

Added to library: Sat May 27 10:10:14 2017
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	T	P	L	L	E	L	K	D	I	R	R	S	Y	P	A	G	D	E	Q	V	E	V	L	K	G	I	S	L	D	I	Y	A	G	E	M	V	A	I	V	G	A	S	G	S	G	K	S	T	L	M	N	I	L	G	C	L	D	K	A	T	S	G	T	Y	R	V	A	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S												S	S	S	S				S										T	T							B		T	T	S	S									T	T	S	S			S	S	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	V	A	T	L	D	A	D	A	L	A	Q	L	R	R	E	H	F	G	F	I	F	Q	R	Y	H	L	L	S	H	L	T	A	E	Q	N	V	E	V	P	A	V	Y	A	G	L	E	R	K	Q	R	L	L	R	A	Q	E	L	L	Q	R	L	G	L	E	D	R	T	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	S												T	B			B		T	T					S	S	S												S	S																			T		S	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	P	A	Q	L	S	G	G	Q	Q	Q	R	V	S	I	A	R	A	L	M	N	G	G	Q	V	I	L	A	D	E	P	T	G	A	L	D	S	H	S	G	E	E	V	M	A	I	L	H	Q	L	R	D	R	G	H	T	V	I	I	V	T	H	D	P	Q	V	A	A	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S															T	T	T		S							T	T	T	T	S																		T	T								S						T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	R	V	I	E	I	R	D	G	E	I	V	R	N	P	P	G	W	R	Q	F	V	S	G	F	N	E	A	L	T	M	A	W	R	A	L	A	A	N	K	M	R	T	L	L	T	M	L	G	I	I	I	G	I	A	S	V	V	S	I	V	V	V	G	D	A	A	K	Q	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B						T	T									T																					T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	L	A	D	I	R	S	I	G	T	N	T	I	D	V	Y	P	G	K	D	F	G	D	D	D	P	Q	Y	Q	Q	A	L	K	Y	D	D	L	I	A	I	Q	K	Q	P	W	V	A	S	A	T	P	A	V	S	Q	N	L	R	L	R	Y	N	N	V	D	V	A	A	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S										S	S	S	T	T							S					T	T							T	S	T	T		S															T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	G	V	S	G	D	Y	F	N	V	Y	G	M	T	F	S	E	G	N	T	F	N	Q	E	Q	L	N	G	R	A	Q	V	V	V	L	D	S	N	T	R	R	Q	L	F	P	H	K	A	D	V	V	G	E	V	I	L	V	G	N	M	P	A	R	V	I	G	V	A	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T					T	T						S											T																T	T					T	T		B				T	T	B			B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	Q	S	M	F	G	S	S	K	V	L	R	V	W	L	P	Y	S	T	M	S	G	R	V	M	G	Q	S	W	L	N	S	I	T	V	R	V	K	E	G	F	D	S	A	E	A	E	Q	Q	L	T	R	L	L	S	L	R	H	G	K	K	D	F	F	T	W	N	M	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S		T	T	S														T	T			S			S								T	T			S	T	T	T												S	S	S									S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	L	K	T	V	E	K	T	T	R	T	L	Q	L	F	L	T	L	V	A	V	I	S	L	V	V	G	G	I	G	V	M	N	I	M	L	V	S	V	T	E	R	T	R	E	I	G	I	R	M	A	V	G	A	R	A	S	D	V	L	Q	Q	F	L	I	E	A	V	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																										T										T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
Sequence	C	L	V	G	G	A	L	G	I	T	L	S	L	L	I	A	F	T	L	Q	L	F	L	P	G	W	E	I	G	F	S	P	L	A	L	L	L	A	F	L	C	S	T	V	T	G	I	L	F	G	W	L	P	A	R	N	A	A	R	L	D	P	V	D	A	L	A	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						S		S	S

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PDB structure

FASTA sequence

Hidden Markov model

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