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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5nbsA_

Fold library idPDB HeaderMoleculeTitle
c5nbsA_2.25PDB header: hydrolaseChain: A: PDB Molecule: beta-glucosidase;


Added to library: Sat Mar 24 08:55:19 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLAYSEPHYPSPWMDPKAIGWEEAYEKAKAFVSQLTLLEKVNLTTGIGWGAEQCVGQTGAIPRLGLKSMC
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Known secondary structure (DSSP)








S




TT
TTTTT

BB

TTSSSSSB

BGGGTB


 .........80.........90.........100.........110.........120.........130.........140
Sequence MQDAPLAIRGTDYNSVFPAGVTTAATFDRGLMYKRGYALGQEAKGKGVTVLLGPVAGPLGRAPEGGRNWE
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Known secondary structure (DSSP)

TTB
TT
SS

B


T

T
S


B
SS

SSTT
TTGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence GFSTDPVLTGIAMAETIKGTQDAGVVACAKHFIGNEQEHFRQVGESQDYGYNISETLSSNIDDKTMHEMY
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Known secondary structure (DSSP) S

SSTT
S



STTS
TT


SS



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LWPFVDAIRAGVGSFMCAYTQANNSYSCQNSKLLNNLLKQENGFQGFVMSDWQAHHSGVASAAAGLDMSM
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Known secondary structure (DSSP) STT
S
SSTTGGG







T


S
TT



TT

BBS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PGDTMFNSGRSYWGTNLTLAVLNGTVPQWRIDDMAMRIMAAFFKVGQTVEDQEPINFSFWTLDTYGPLHW
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Known secondary structure (DSSP) SSSSSTT
S

SSTTSSS
TT

SSS






TT


ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence AARKDYQQINWHVNVQGDHGSLIREIAARGTVLLKNTGSLPLKKPKFLAVIGEDAGPNPLGPNGCADNRC
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Known secondary structure (DSSP) TTT







TTT
SS

S

S
SSGGGS

TT
TTSSGGG

 .........430.........440.........450.........460.........470.........480.........490
Sequence NNGTLGIGWGSGTGNFPYLVTPDQALQARAVQDGSRYESVLRNHAPTEIKALVSQQDATAIVFVNANSGE
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Known secondary structure (DSSP)

S

SS
BSSS



S



T


S

TSTT


B
 .........500.........510.........520.........530.........540.........550.........560
Sequence GFIEIDGNKGDRLNLTLWNEGDALVKNVSSWCNNTIVVLHTPGPVLLTEWYDNPNITAILWAGMPGQESG
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Known secondary structure (DSSP) TT
TTSS
S
SS
STT
SS
SS



TTTTT
TT




TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence NSITDVLYGRVNPSGRTPFTWGATRESYGTDVLYEPNNGNEAPQLDYTEGVFIDYRHFDKANASVLYEFG
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Known secondary structure (DSSP) TTSS





SS
SSSGGG





S
SSTTS


TTTT

T


TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence FGLSYTTFEYSNLKIEKHQVGEYTPTTGQTEAAPTFGNFSESVEDYVFPAAEFPYVYQFIYPYLNSTDMS
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Known secondary structure (DSSP)

B
SS










SB






S




GGGGB

TTTS


TT


S
BSSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence ASSGDAQYGQTAEEFLPPKANDGSAQPLLRSSGLHHPGGNPALYDIMYTVTADITNTGKVAGDEVPQLYV
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Known secondary structure (DSSP) T
TT



S
TTTT

S

B

TTSBTTBTTS
GGGG

SSS


 .........780.........790.........800.........810.........820.........830.........840
Sequence SLGGPEDPKVVLRGFDRLRVEPGEKVQFKAVLTRRDVSSWDTVKQDWVITEYAKKVYVGPSSRKLDLEEV
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Known secondary structure (DSSP)


TTS
S



TT
TGGG
TTTT

SS

SSSS


 ..
Sequence LP
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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