Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n8oA_

Fold library idPDB HeaderMoleculeTitle
c5n8oA_3.90PDB header: transferaseChain: A: PDB Molecule: dna helicase i;


Added to library: Sat May 6 08:56:39 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGKGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQ
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)



TTSSTTSSTTTSS


STT

SS

T

TTS




 .........80.........90.........100.........110.........120.........130.........140
Sequence DGSNKHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLV
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TTSS





SS

TT
TT




 .........150.........160.........170.........180.........190.........200.........210
Sequence MALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEA
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) B




TTSS




B

B
S


SSS







S
SS

ST
 .........220.........230.........240.........250.........260.........270.........280
Sequence LGYETEVVGKHGMWEMPGVPVEAFSVDPEIRMAEWMQTLKETGFDIRAYRDAADQRTEIRTQAPDVQQAV
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)



B
SSSTT

B
TTS
TTS



TTT


S



 .........290.........300.........310.........320.........330.........340.........350
Sequence TQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDEL
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) TTT
S

TTS
SSS



TTTSB

STTT
S

BS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQG
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S







TTS



S



TS
S



STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence REVQIIAADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNV
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)



B

SSSSSTTTTTS
SS

S




SS
SSSS
S

SS


SSGGG

SSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence QVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)






SS

STT















SSTT

 .........570.........580.........590.........600.........610.........620.........630
Sequence VSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYV
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
SSSTSSS
SS




B



SSSTT
STT

TT
TTTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence IDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)


TTTT


TT



GGG

TTB

B




TT


S

TTSS

TT

S
B
 .........710.........720.........730.........740.........750.........760.........770
Sequence SEDAMTVVVPGRAEPASLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMNATLNGLARSGRD
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)
SS



TT
SS




S
GGG

SSS
TT



SSB


TT


TTTTTSSSSBSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence VRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTPAQQAIHLALPVLESKNLA
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)


SSTTTTTTTSSSS

S


SS
SSTT


TT
SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence FSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

TTS

TT

STSSB




S

SSS
SSS


B
 .........920.........930.........940.........950.........960.........970.........980
Sequence EAVTPLMERVPGELMETLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPASERPRVV
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) T
S
S




S





SS
S
TTTTSS

S

B
SSS
SST

SS




 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTEMARAYALIAAGG
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)
SSTS


SSSS



SS



GGG

S

TTTT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence GRAVASGDTDQLQAIAPGQSFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPS
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)


SBSSS


S
SS

SSSS











SSGGGS
GGGS
S
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence QVPRLEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDIPMTLYEAIVRDYTGRTPEAREQTLIVT
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)
S

SSS



SSSS



TTTTTTT








SSTSS
GGG

S
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence HLNEDRRVLNSMIHDAREKAGELGKEQVMVPVLNTANIRDGELRRLSTWEKNPDALALVDNVYHRIAGIS
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) S
TTSS
S
S



S

SGGGGSTT
S

SSS


B
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence KDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDKIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP) TTTT
SSS



SSS

TT




SS
SS

TTTT

SS

S


SS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence VTLSDGQQTRVIRPGQERAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) B
SS



SS
GGG



STTT





S




SSSSS



TSS
SS
 .........1410.........1420.........1430..
Sequence HVQVYTDNRQGWTDAINNAVQKGTAHDVLEPK
Predicted secondary structure












SS confidence































Known secondary structure (DSSP)



SSSSS





GGGTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D