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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n8lA_

Fold library idPDB HeaderMoleculeTitle
c5n8lA_UNKPDB header: rna binding proteinChain: A: PDB Molecule: risc-loading complex subunit tarbp2;


Added to library: Sat Feb 24 08:28:47 2018
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence GGSLPSIEQMLAANPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKA
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Known secondary structure (DSSP)





TTSTTS
T




SSS
TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AKHKAAEVALKHLKGCNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKL
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Known secondary structure (DSSP) T


TT



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TTT

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SS
 .........150.....
Sequence AKRNAAAKMLLRVHT
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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