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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n80A_

Fold library idPDB HeaderMoleculeTitle
c5n80A_1.92PDB header: transferaseChain: A: PDB Molecule: lipopolysaccharide 1,6-galactosyltransferase;


Added to library: Sat Mar 17 13:31:23 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AMKIAFIGEAVSGFGGMETVISNVIHTFENSSPKINCEMFFFCRNDKMDKAWLKEIKYAQSFSNIKLSFL
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Known secondary structure (DSSP)




S
STTSSS

SSS
S

GGGTTS


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RRAKHVYNFSQWLKETSPDIVICIDVISCLYANKARKKSGKHFTIFSWPHFSLDHKKHAECITYADYHLA
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Known secondary structure (DSSP)

SSSS





SS
STTSTTGGGGGGSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ISSGIKEQIMARGISAQDISVVYNPVSIKTVIVPPPERDKPAVFLYVGRLKFEGQKRVKDLFDGLARTTG
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Known secondary structure (DSSP) SSTT

GGG



B


S






TTS
S


SSTTT
T

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence EWQLHIIGDGSDFEKCQAYSRELGIEQRVIWYGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLEAMS
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Known secondary structure (DSSP)



TTT
GGG



SST


S

SB
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence YGIPCISSDCMSGPRDMIKPGLNGELYTPGAIDDFVGHLNRVISGEVKYQHDIIPGTIERFYDVLYFKNF
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Known secondary structure (DSSP) TT



BSS

BTTT
TT
TSS


TTTGGGGGGGGB
 ........
Sequence NNAIFSKL
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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