Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5n6yD_

Fold library idPDB HeaderMoleculeTitle
c5n6yD_1.35PDB header: oxidoreductaseChain: D: PDB Molecule: nitrogenase vanadium-iron protein alpha chain;


Added to library: Sat Jul 29 08:23:01 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PMVLLECDKDIPERQKHIYLKAPNEDTREFLPIANAATIPGTLSERGCAFCGAKLVIGGVLKDTIQMIHG
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)
B


GGGTTSGGGGGG

TT

GGG




S



TTS
B



TTTGGG
SS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence PLGCAYDTWHTKRYPTDNGHFNMKYVWSTDMKESHVVFGGEKRLEKSMHEAFDEMPDIKRMIVYTTCPTA
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
TTSS





SSS







SSTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence LIGDDIKAVAKKVMKDRPDVDVFTVECPGFSGVSQSKGHHVLNIGWINEKVETMEKEITSEYTMNFIGDF
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TT


TT



TTSSSSTTTTS





SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence NIQGDTQLLQTYWDRLGIQVVAHFTGNGTYDDLRCMHQAQLNVVNCARSSGYIANELKKRYGIPRLDIDS
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)
GGGT
TT

TTGGG
SS






 .........290.........300.........310.........320.........330.........340.........350
Sequence WGFNYMAEGIRKICAFFGIEEKGEELIAEEYAKWKPKLDWYKERLQGKKMAIWTGGPRLWHWTKSVEDDL
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) SST
TT
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GVQVVAMSSKFGHEEDFEKVIARGKEGTYYIDDGNELEFFEIIDLVKPDVIFTGPRVGELVKKLHIPYVN
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

SS

S
TT
S
B

S
GGGT

 .........430.........440.........450.........460.........470...
Sequence GHGYHNGPYMGFEGFVNLARDMYNAVHNPLRHLAAVDIRDKSQTTPVIVRGAA
Predicted secondary structure

























SS confidence




















































Known secondary structure (DSSP) TTT
SS


SS


TT
TT











Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D