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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n6uC_

Fold library idPDB HeaderMoleculeTitle
c5n6uC_3.08PDB header: hydrolaseChain: C: PDB Molecule: beta-mannosidase;


Added to library: Sat Apr 15 08:59:04 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEILKLDGEWEFKAVKDKKWRKAKVPGCVHLDLMENGLIPDPFVGENELEVQWVEKEDWIYRKKFQVGKE
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Known secondary structure (DSSP)


STT
S

SS

TSS

TTSTTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence FLKYSSIYLEFEGIDTFSEIYLNGKKIGETDNMFIAWEFNVKDLLVEGENELEVRLFSPSKVLEERAKNY
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Known secondary structure (DSSP) TSSS


S
SS

BSSS

TTT

S

TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PYKLHGGDYSPRVFGRKAQYSFGWDWGPRLATSGIWKSVKLKGWNKARLLDVWVPVRSLGENAQINIELD
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Known secondary structure (DSSP) SS



SS
SGGGGSBS
GGGB

SSS
B



S

S
SS


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IELQESIPVDVAFRISHKKPVLEQRLRFTLPEGRVFLKIPLTIKNPKLWFPRGYGEQNLYTLQLVLLDEK
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Known secondary structure (DSSP) SS

SSS



SSS


B

TTSS
B


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GEVLDKVEERFGIRKVELFTQEDNKGESFVFKINNIPVFAKGANWIPADSFLPRIKEEDYRLLLIRAKEA
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Known secondary structure (DSSP) S
S





B
SSSB

TT


SSSSGGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence GVNMLRVWGGGIYENDIFYELCDELGIMVWQDFMFACAEYPDDENFLNDVQKEAEFVIKRLRNHPSIVLW
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Known secondary structure (DSSP) T


TTS



T

S
BSS



STT
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence CGNNCNHWGYYAKWWGEREKFWGEEIYSRVLPDVCARLDLTRPYWPSSPYGGKDPNSQEVGDRHNWEVWH
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Known secondary structure (DSSP)

BSSSTT
S
SS
TTT
TTS
S
SS
BSSSTB
SSSS

TTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence GWIDFNGYLKDNGRFISEFGMQAPPVAETIRKFITSEKEYYPQSREMEFHNKAREGTERIIRYIAGHFKI
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Known secondary structure (DSSP) S


GGGGGG


S



B



SSSTT
STT
T

STTS

 .........570.........580.........590.........600.........610.........620.........630
Sequence TEDMNEYIYLSQIIQGLALKTGIEHWRNNKFHTSGSLIWQWNDCWPVVSWSIIDYYKKLKPSYYFVKRAF
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Known secondary structure (DSSP)


GGGS
S
SB
SSS
SBS
SB
TT

B
T
 .........640.........650.........660.........670.........680.........690.........700
Sequence RDIKVNIEPRNGKLLVFGVNDTLEKFYGKIEYAISTFRGKRRGKKEVDIEIPANSSVILGEFNLEDVDKF
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Known secondary structure (DSSP)
S

TT
SSS
SSS


S

TT
TT

TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence KEFFYVQLYNEKDELIDQNEYFFAPFRHLELPNAVVVYSVKEIEENSYLLNIESDFLALWVSLKLENAEW
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Known secondary structure (DSSP) TTT



SS
GGGS






STTSS

TT


 .........780.........790.........800.........810.
Sequence EDNFVNIYPKTKYSIRFKAPYTLKEVESKLKLEGYNLKKVI
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Known secondary structure (DSSP) SS
S
TT

SS


SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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