Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n6mA_

Fold library idPDB HeaderMoleculeTitle
c5n6mA_3.10PDB header: membrane proteinChain: A: PDB Molecule: apolipoprotein n-acyltransferase;


Added to library: Sat Jul 15 08:39:41 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WISRPGWPGHLLALAAGALTPLALAPFDYWPLAILSIALLYLGLRGLPGKSALWRGWWYGFGAFGAGTSW
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)

SSSSTTTGGGTSSS

TTSS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IYVSIHDYGAASVPLASLLMLGFTAGVAFFFALPAWLWARCLRRDNAPLGDALAFAALWLALELFRSWFL
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) TT

T

STTTTTTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TGFPWLYAGYSQLQGPLAGLVPVGGVWLSSFVIALSAALLVNLPRLFPHGASLLLGLVLLLGPWAAGLYL
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) S



S
GGGGGTTSGGGGTGGGTTTST
 .........220.........230.........240.........250.........260.........270.........280
Sequence KGHAWTHSAGEPLRVVAIQGNIAQEPNQVRAQLDLYRDLSLPQQDVDLIVWPETAVPILQDMASGYLGAM
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TT



SS








TTTT

S
S
TTSS
S
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GQVADEKNAALITGVPVRERLADGKSRYFNGITVVGEGAGTYLKQKLVPFGEYVPLQDLLRGLIASDFAR
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TT

SSS
S


S

TTTT

TTTTS






 .........360.........370.........380.........390.........400.........410.........420
Sequence GPADQPLLKAKGYQIAPYICYEVVYPEFAAALAAQSQVLLTVSNDTWFGTSIGPLQHLQMAQMRALESGR
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

SS


TTGGGGG
TT
S

TTT
SSST
 .........430.........440.........450.........460.........470.........480.........490
Sequence WMIRATNNGVTGLIDPYGRIVRQIPQFQQGILRGEVIPMQGLTPYLQYRVWPLAGLAGVLLLWALLGRQL
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
SSS

TTS

SSS





S
S
 .
Sequence R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D