Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n60Q_

Fold library idPDB HeaderMoleculeTitle
c5n60Q_7.70PDB header: transferaseChain: Q: PDB Molecule: rna polymerase i-specific transcription initiation factor


Added to library: Sat Apr 15 08:50:26 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TFIRGPICGTDNCPSRLWRIIDGRRTCQYGHVMKLIGHEAKLLFLKSFQFILKRQIRWLITEMRFPKEFE
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)




S

SSTT





TTS

TT

B




S
T


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence HVAKIIWLKILKTINDQPQEELKLQLHMTSTISILYLASTHLSLPVYTCDYIKWICTAKMPYFQASEILR
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TS


SS





TT
S

TTSS

SSSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence IQLPNYYVSILEGSISPFNGQLYNKIALTCGMIHFKEFFNSEISCQGLLLKLVMQCALPPEFYFYTKQVI
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)



TT


TTTTTSTTTS




TT

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence EFEETDIRNLTLWERTDERHTGRVSNHAELRVLSYFMLTINWMLSFDRDRQYPLKWILSLTESLTQRTTT
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) TSS







SSS


SS
SS
ST
TT

S
TTS



 .........290.........300.........310.........320.........330.........340.........350
Sequence SESIGRNIVKVVYPDKPTSSDYFQWSEEETLEFLKWMEKQFLPTQTDQKIARRKLYKIFPLDSTHQLTFI
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) T
SSSST

TSS



TTS





S

 .........360.........370.........380.........390.........400.........410
Sequence EDLQERYAKQTPFFPPARKEAIGRLLTHIASQLLVDFAISKEQLKDCISRIKNACLHRMN
Predicted secondary structure
















SS confidence



























































Known secondary structure (DSSP) T
TT


TTT

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D