Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n4dA_

Fold library idPDB HeaderMoleculeTitle
c5n4dA_1.62PDB header: hydrolaseChain: A: PDB Molecule: prolyl oligopeptidase;


Added to library: Sat Nov 4 08:40:42 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WAPGNYPSTRRSDHVDTYQSASKGEVPVPDPYQWLEESTDEVDKWTTAQADLAQSYLDQNADIQKLAEKF
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)

TT









TTT
TTGGGGS
ST
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence RASRNYAKFSAPTLLDDGHWYWFYNRGLQSQSVLYRSKEPALPDFSKGDDNVGDVFFDPNVLAADGSAGM
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
S




TTS

SS
SS
SSSS


GGG

GGGSSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VLCKFSPDGKFFAYAVSHLGGDYSTIYVRSTSSPLSQASVAQGVDGRLSDEVKWFKFSTIIWTKDSKGFL
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
TTSSTT
SSTTS
BSS




S


SS


TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence YQRYPARERHEGSDRNAMMCYHKVGTTQEEDIIVYQDNEHPEWIYGADTSEDGKYLYLYQFKDTSKKNLL
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)




TT






TTS
GGG


TTSTT

TTS
SSSSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence WVAELDEDGVKSGIHWRKVVNEYAADYNIITNHGSLVYIKTNLNAPQYKVITIDLSKDEPEIRDFIPEEK
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)

TT
S
TT



SS
S
TT
TT
TT
TTSSS


BT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DAKLAQVNCANEEYFVAIYKRNVKDEIYLYSKAGVQLTRLAPDFVGAASIANRQKQTHFFLTLSGFNTPG
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TBTTTTT
TT

STT

S

TTSSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence TIARYDFTAPETQRFSILRTTKVNELDPDDFESTQVWYESKDGTKIPMFIVRHKSTKFDGTAAAIQYGYG
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) TTS
TTSS


SS

GGG
TTS
TT


SS





 .........500.........510.........520.........530.........540.........550.........560
Sequence GFATSADPFFSPIILTFLQTYGAIFAVPSIRGGGEFGEEWHKGGRRETKVNTFDDFIAAAQFLVKNKYAA
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)
TT







T


TTSSTT
TTSGGGTTTSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence PGKVAINGASNGGLLVMGSIVRAPEGTFGAAVPEGGVADLLKFHKFTGGQAWISEYGNPSIPEEFDYIYP
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TT
TS
TTS
SS



TTTGGGSTT
GGG

TTSGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence LSPVHNVRTDKVMPATLITVNIGAGRVVPMHSFKFIATLQHNVPQNPHPLLIKIDKSWLGHGMGKPTDKN
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) G
GGG


SSS


TTS

T
TT
SS

TT



 .........710.........720
Sequence VKDAADKWGFIARALGLELK
Predicted secondary structure



SS confidence



















Known secondary structure (DSSP) TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D