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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n40A_

Fold library idPDB HeaderMoleculeTitle
c5n40A_1.70PDB header: cell adhesionChain: A: PDB Molecule: putative invasin;


Added to library: Sat Apr 15 08:45:00 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GGGRGNLSTTNSTLVAAPVNIEANGSDTSVVTLTLRDSNNNPVTGQTVAFTSTLGTLDNVTEQASGLYTA
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Known secondary structure (DSSP)

TTS
B
TTT
SSSSS


BBTTS
B

S

SSS


TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TLTAGTLTGTASLSVNVDGNNLGTTPATINVIPAPVDLTVLTDNARKNIGQAISLTVIAKYKSTDVVAPN
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Known secondary structure (DSSP)

S

TT








S
STTS
TTSS
B
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VKMTFEQVAVVNRQNSPVSSSGVVQIADANYDAFTGMTDANGQLTVSVTDPNGIGVQTTLRAAAESGDME
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Known secondary structure (DSSP)

TTS
B
SSS


TTGGG



TTS
TT

S
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NTNVTFNVITSPDSAQASMWGNMAETLTASGVTFKRPYLAAEKPGTIGTNVENNETWAMFNQSQAVAMCT
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Known secondary structure (DSSP) BTTS
S
TT
SS
B


STT


BGGG
TT

TTB
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VPSSSQLVSLYNLYPLNQIQTVAGWPTMQVYRSSTSAVIGQHFYVYMNTGNYAYNSIGNGDVDGNYNVSC
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Known secondary structure (DSSP)


STTTTT



SS
TT
TTT



TTTT

BB


 ..
Sequence SL
Predicted secondary structure
SS confidence

Known secondary structure (DSSP) B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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