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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n1aB_

Fold library idPDB HeaderMoleculeTitle
c5n1aB_2.15PDB header: translationChain: B: PDB Molecule: utp4;


Added to library: Sat Jun 17 09:00:20 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PTTENLYFQGAHXDIHRCRFVRYPASAINAVAFTHSALPVVSSSYLQKNIQVRLAIGRANGDIEIWNPLN
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Known secondary structure (DSSP)

TT








S
SB







TTTT



TTS

GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence GGWYQEVIIPGGKDRSVDGLVWVTDPDEEXADGKIIHGKSRLFSIGYTTTITEWDLEKARAKKHASGQHG
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Known secondary structure (DSSP) G




TT







TTS




SSSTTTT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EIWCFGVQPLPHKANAAAAQNRKLVAGTVDGNLVLYSIEDGDLKFQKTLTRTSKKTKFVSIAFQSHNIVI
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Known secondary structure (DSSP)




SS

TS
TTS

GGG






TT

SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VGCSNSTICAYDVRTGTXLRQXTLGSKNIIVWAVKCLPNGDIVSGDSTGQVCIWDGKTYTQAQRIQSHTQ
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Known secondary structure (DSSP) SSSTTT











TTS

TTS
TTT



SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DVLCLSVSADGSKIISGGXDRRTAVYEPXAGQSGRWSKVFHRRYHQHDVKAXASFEGKGXSVVVSGGSDA
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Known secondary structure (DSSP)

TTS

TTS
SSSTT

SSS
TTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SPIVLPLRALGKEFHRTLPHLPQHPTVLSAPKARYILSWWENEIRIWHLLNNRKFLAQVLIKGASHITSA
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Known secondary structure (DSSP)

GGGTTSS



SS
SS

TTTTTT




SSS


 .........430.........440.........450.........460.........470.........480.........490
Sequence SISEDGTLLAASTPTDVKVFHLDPAAAQRNGQLYIKKVNXTGTGLGATRVQISPDKRWICWAEEGSKVXI
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Known secondary structure (DSSP)
TTSS
SS

TTSS




S


S
TTSSTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence SRVHATESADGISYTVSVPHKLHRLRRQIPKHILLGGLGSYDRNVSQIAFSADSRXLSVADLAGYIDTWV
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Known secondary structure (DSSP) TT










TSTTTTGGG

TTS
TT

 .........570.........580.........590.........600.........610.........620.........630
Sequence LRGPGERWARNPKAAXIPKLSAAPVVLSFSPTPRDDGDYDLLVVTTLKQLLIFNPLRGXLSEWSRRNTYP
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Known secondary structure (DSSP)




TTGGGS


SS

SS

TTS


TT

TTTT
S
GG
 .........640.........650.........660.........670.........680.........690.........700
Sequence KLPEPFRDTRDQVKGIVWQGQRAWFYGVASLFXFDLSQDFSAKWWHTYQFRPIXGIVPIEGIPPLEVALI
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Known secondary structure (DSSP) GS
TTTT
TTS
TTSS
TTS









S




 ......
Sequence ERPLSE
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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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