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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n0cB_

Fold library idPDB HeaderMoleculeTitle
c5n0cB_2.60PDB header: toxinChain: B: PDB Molecule: tetanus toxin;


Added to library: Sat Jun 24 08:27:21 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPITINNFRYSDPVNNDTIIMMEPPYCKGLDIYYKAFKITDRIWIVPERYEFGTKPEDFNPPSSLIEGAS
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Known secondary structure (DSSP)








TTS


SSS
GGGTTTT

TT

TT

GGGGS

SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EYYDPNYLRTDSDKDRFLQTMVKLFNRIKNNVAGEALLDKIINAIPYLGNSYSLLDKFDTNSNSVSFNLL
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Known secondary structure (DSSP) B
TTTT
SS



S

TTS
TT


STTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EQDPSGATTKSAMLTNLIIFGPGPVLNKNEVRGIVLRVDNKNYFPCRDGFGSIMQMAFCPEYVPTFDNVI
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Known secondary structure (DSSP)


TT




S

SBTT



TT
GGGTTS




SS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ENITSLTIGKSKYFQDPALLLMHELIHVLHGLYGMQVSSHEIIPSKQEIYMQHTYPISAEELFTFGGQDA
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Known secondary structure (DSSP)
STTT
S


TT



S

B
B


STTB




B

SGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence NLISIDIKNDLYEKTLNDYKAIANKLSQVTSCNDPNIDIDSYKQIYQQKYQFDKDSNGQYIVNEDKFQIL
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Known secondary structure (DSSP) GGS
T

SSTT

T
TTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence YNSIMYGFTEIELGKKFNIKTALSFFSMNHDPVKIPNLLDDTIYNDTEGFNIESKDLKSEYKGQNMRVNT
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Known secondary structure (DSSP) T

T



S
TTS





TTTT
TTT
BTTTBT

TTTT
SGGGTTTBTTT
G
 .........430.........440.........450.........460.........470.........480.........490
Sequence NAFRNVDGSGLVSKLIGLCKKELCIKIKNEDLTFIAEKNSFSEEPFQDEIVSYNTKNKPLNFNYSLDKII
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Known secondary structure (DSSP) GG


TTT



GGGSB

B
STTS

GGGS


SS










 .........500.........510.........520.........530.........540.........550.........560
Sequence VDYNLQSKITLPNDRTTPVTKGIPYAPEYKSNAASTIEIHNIDDNTIYQYLYAQKSPTTLQRITMTNSVD
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SS









SS

SS

TT


SSS


S
 .........570.........580.........590.........600.........610.........620.........630
Sequence DALINSTKIYSYFPSVISKVNQGAQGILFLQWVRDIIDDFTNESSQKTTIDKISDVSTIVPYIGPALNIV
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Known secondary structure (DSSP) STT




S
SS


B

TTSTT


B
TTT

 .........640.........650.........660.........670.........680.........690.........700
Sequence KQGYEGNFIGALETTGVVLLLEYIPEITLPVIAALSIAESSTQKEKIIKTIDNFLEKRYEKWIEVYKLVK
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Known secondary structure (DSSP)
TT
TT

GGGG
SS

















SST
 .........710.........720.........730.........740.........750.........760.........770
Sequence AKWLGTVNTQFQKRSYQMYRSLEYQVDAIKKIIDYEYKIYSGPDKEQIADEINNLKNKLEEKANKAMINI
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Known secondary structure (DSSP) TTT


TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence NIFMRESSRSFLVNQMINEAKKQLLEFDTQSKNILMQYIKANSKFIGITELKKLESKINKVFSTPIPFSY
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Known secondary structure (DSSP) TTTTTGGGTT
TTTTTS




S
 .........850.........860.........870.........880.........890.........900.........910
Sequence SKNLDCWVDNEEDIDVILKKSTILNLDINNDIISDISGFNSSVITYPDAQLVPGINGKAIHLVNNESSEV
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Known secondary structure (DSSP) SS


S


SS

TTT
SSS


TT

SSSSSTT

 .........920.........930.........940.........950.........960.........970.........980
Sequence IVHKAMDIEYNDMFNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKGSGWSVSLKGNNLIWTLKDSAG
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Known secondary structure (DSSP)

GGGTTTTTSS





SS





SS
SS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence EVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEITGLGAIREDNNITLKLDRCNN
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Known secondary structure (DSSP)


SBGGG
TTSSS

SSSTT

S






SS


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence NNQYVSIDKFRIFCKALNPKEIEKLYTSYLSITFLRDFWGNPLRYDTEYYLIPVASSSKDVQLKNITDYM
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Known secondary structure (DSSP) TT
SS


S

SSB
B
TTSSB
BSS
STTTTSSTTB
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence YLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEIDSFVKSGDFIKLYVSYNNNEHIVGYPKDGNAFN
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Known secondary structure (DSSP)

TTTT

S
S

SS

S



B
BTT

TTS
TT

T
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence NLDRILRVGYNAPGIPLYKKMEAVKLRDLKTYSVQLKLYDDKNASLGLVGTHNGQIGNDPNRDILIASNW
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Known secondary structure (DSSP) TT
T


SSS




S
TTS

B
TTS


TTS

GG
 .........1270.........1280......
Sequence YFNHLKDKILGCDWYFVPTDEGWTND
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Known secondary structure (DSSP) GGG
TTSSS
TT


BTTB



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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