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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mzaA_

Fold library idPDB HeaderMoleculeTitle
c5mzaA_2.78PDB header: cell adhesionChain: A: PDB Molecule: erythrocyte membrane protein 1 (pfemp1);


Added to library: Sat Mar 25 09:00:40 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNPCAKPHGKKLATVKQIAQYYKRKAYIQLNERGSRSALKGDASQGQYDRGGKADDFKTKLCEINEKHSN
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Known secondary structure (DSSP)

TTS
S






T



GGGS

TTS

TT
GGG

TTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence ARSNSLNPCNGKDNNKVRFNVGTPWQSGEKIATATDVYLPPRRQHFCTSNLEYLINGGHQAILNVKNGKI
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Known secondary structure (DSSP) S
TTS
STTTTS
SS

TT
TT


STTT
SSTT

T
S
TSSBTTB
GGGGS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NHSFLGDVLLAAKYQAQHTMKDYKSKNDKEGICRAIRYSFADIGDIIKGTDLWDKDGGEIKTQNHLVTIF
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Known secondary structure (DSSP)
S
TT
T

S

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DKIKAQLPKDIKGKYTGTKHLELRKDWWEANRDQVWKAMQCGNDNPCSGESDHTPLHDYIPQRLRWMTEW
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Known secondary structure (DSSP) TS
TT


TT
TTTT
SS



TBTTB
SGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AEWYCKEQSRLYDKLKVCEESGECATCKEACEEYNKEIKKWEQQWDAISYKYLMLYAKARITAINGGPGY
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Known secondary structure (DSSP) GGGG




STTSTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YNTEVQEEDKPVVDFLYNLYLQNGGKKGPPPDTHRVKATPYSTAAGYIHQEAHIGDCQKQTQFCKNKNGE
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Known secondary structure (DSSP)





GGGTT


S

TTTT




GGGSS

TT

S

BSSSSS


 .........430.........440
Sequence ADPTYAFRDKPHDHDTACKC
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Known secondary structure (DSSP)

TTBTT
SS
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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