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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mxnA_

Fold library idPDB HeaderMoleculeTitle
c5mxnA_3.70PDB header: transport proteinChain: A: PDB Molecule: type vi secretion protein;


Added to library: Sat Aug 5 08:30:59 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSLLDEIMAQTRIAPSEEGYDIAKKGVAAFIENLMGSQHSAEPVNKSLVDQMLVELDKKISAQMDEILHN
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Known secondary structure (DSSP)
STTSTTS
SSTTS



TTTTTTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDELLEDFEFAPETAQSGLYKHVYSAGYGQFGGEPV
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Known secondary structure (DSSP) TTTTS
TTTT








SSSGGGSS




SSSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence GAIIGNYAFTPSTPDMKLLQYMGALGAMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRS
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Known secondary structure (DSSP)





B
SSTTTT

B
T
SSGGGSTT
S
STTTTTSGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRESEDARYLGLTAPRFLLRVPYDPIENPVKSFNYAENVSASHEHYLWGNTAFAFATRLTDSFAKYRWCP
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Known secondary structure (DSSP) TSGGGGG
S






SSSS
BTTB






S
TTSS

SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence NIIGPQSGGAVEDLPVHVFESMGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFSANSIQK
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Known secondary structure (DSSP)

S
TTTT








SSS
SSSS


TT



TTSS





S

 .........360.........370.........380.........390.........400.........410.........420
Sequence PKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLERELNSWIKQYVADQEN
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Known secondary structure (DSSP)




SSTTSSSSSSTTTTTTS


TTSB


SS
 .........430.........440.........450.........460.........470...
Sequence PPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGANFELSLVGRL
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Known secondary structure (DSSP)

TTS






SSSSS



















S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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