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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mqrA_

Fold library idPDB HeaderMoleculeTitle
c5mqrA_2.20PDB header: hydrolaseChain: A: PDB Molecule: beta-l-arabinobiosidase;


Added to library: Sat Mar 25 08:56:54 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRIHYTGKELSNPTYHDGQLSPVVGVHNIQLVRANREHPEASNGNGWTYNHQPXLAYWNGQFYYQYLADP
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Known secondary structure (DSSP)









TTSTTTT

B
TT



SSS

GGGTTT

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SDEHVPPSQTFLXTSKDGYQWTNPEIVFPPYKVPDGYTKESRPGXQAKDLIAIXHQRVGFYVSKSGRLIT
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Known secondary structure (DSSP) SSTT
S

SSSSS






B

TT


TTSTT


SS
B


S


TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence XGNYGVALDKKDDPNDGNGIGRVVREIKKDGSFGPIYFIYYNHGFNEKNTDYPYFKKSKDREFVKACQEI
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Known secondary structure (DSSP)

SSTT

TTSS
S

TTS
B



TT

GGG
SS
BGGG
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LDNPLYXXQWVEEADREDPIIPLKKGYKAFNCYTLPDGRIASLWKHALTSISEDGGHTWAEPVLRAKGFV
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Known secondary structure (DSSP) T
TTSTTTS
TT
TT
SS
S


S

TTS

GGGSSTTSS

SS

TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence NSNAKIWGQRLSDGTYATVYNPSEFRWPLAISLSKDGLEYTTLNLVHGEITPXRYGGNYKSYGPQPRGIQ
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Known secondary structure (DSSP)

SS

TTS


SSSS

SSSS









S

TT

SSB

B
B
 .........360.........370.........380.........390.........400.........410.........420
Sequence EGNGVPADGDLWVSYSVNKEDXWISRIPVPVQINASAHADDDFSKSGSIAELTNWNIYSPVWAPVSLEGE
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Known secondary structure (DSSP) TTS


TT

TTT
SS

SS
SS


GGG
SSGGG
TT
TTS
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence WLKLQDKDPFDYAKVERKIPASKELKVSFDLSAGQNDKGILQIDFLDENSIACSRLELTPDGIFRXKGGS
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Known secondary structure (DSSP)

TT


SS
SSS


TT


TTS
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence RFANXXNYEAGKTYHVEAVLSTADRNIQVYVDGKRVGLRXFYAPVATIERIVFRTGEXRTFPTVDTPADQ
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Known secondary structure (DSSP) S

TT

TTTTTT
SS

S
SS




S
TTS
S

 .........570.........580.........590.........600.........610.........620.........630
Sequence TYDLPDAGGQEPLAEYRIANVKTSSTDKDASSAFLKYADFSHYAESFNGXEDENIVQAIPNAKASEWXEE
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Known secondary structure (DSSP)
S

TTTT







TTTT
SS

GGGTS





SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence NIPLFECPQRNFEEXYYYRWWSLRKHIKETPVGYGXTEFLVQRSYSDKYNLIACAIGHHIYESRWLRDPK
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Known secondary structure (DSSP)


S
TT

TTS

S
SS

TT

GGG


TTTT
S
T
 .........710.........720.........730.........740.........750.........760.........770
Sequence YLDQIIHTWYRGNDGGPXKKXDKFSSWNADAVLARYXVDGDKDFXLDXTKDLETEYQRWERTNRLKNGLY
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Known secondary structure (DSSP) TBTTB

GGGGGS




SB
TTS
B
 .........780.........790.........800.........810.........820.........830.........840
Sequence WQGDVQDGXEESISGGRNKKYARPTINSYXYGNAKALSIXGILSGDEGXAXRYGXRADTLKSLVENDLWN
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Known secondary structure (DSSP)


GGGGT
TT
SS

TT


B
TT
T
 .........850.........860.........870.........880.........890.........900.........910
Sequence TRHQFFETXRTDSSANVREAIGYIPWYFNLPDTTKKYEVAWKEIXDEKGFSAPYGLTTAERRHPEFRTRG
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Known secondary structure (DSSP) TTTT

B
SSSB



BGGGGTT
S
S
GGGGGGG
TTTTTT
SB
TT
TTTT
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence VGKCEWDGAIWPFASAQTLTAXANFXNNYPQTVLSDSVYFRQXELYVESQYHRGRPYIGEYLDEVTGYWL
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Known secondary structure (DSSP) SSS


SSSB
S

SS

STT


S
B
TTT

BT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence KGDQERSRYYNHSTFNDLXITGLIGLRPRLDDTIEINPLIPADKWDWFCLDNVLYHGHNLTILWDKNGDR
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Known secondary structure (DSSP) TTT
GGGTT

SS
STTS
B


SSS





TTS
STTSSSTT
 .........1060.........1070.........1080.
Sequence YHCGKGLRIFVNGKEAGHADTLTRLVCENAL
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Known secondary structure (DSSP) TSS
STTSSSS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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