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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mqnA_

Fold library idPDB HeaderMoleculeTitle
c5mqnA_1.90PDB header: hydrolaseChain: A: PDB Molecule: glycosyl hydrolases family 2, sugar binding domain;


Added to library: Sat Mar 25 09:00:56 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LLREQFQNPSDEAKPWTFWYWMFGAVSKEGITADLEAMKRAGLGGTYLMPIKGIKEGPQYNGKAQQLTPE
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Known secondary structure (DSSP)
S

GGGS
TT


T



TTT
GGG

S

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence WWEMVRFSMEEADRLGLKLGMHICDGFALAGGPWMTPKESMQKIVWSDTIVDGGKIKGLHLPQPEAYEGF
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Known secondary structure (DSSP) T
SSSSSSSSB
TT

GGGB







BTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence YEDISLFALPVKEEAADVMPAQITCANIATGNHIDIKKTVNMDDAGVIRSSYPCYIQYEYEQPFTCRNIE
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Known secondary structure (DSSP)

S
SS
SS





SSS

GGGSS
TT

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IILSGNNYQAHRLKVMASDDGVNYRLVKQLVPARQGWQNTDENSTHAIPATTARYFRFYWTPEGSEPGSE
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Known secondary structure (DSSP)
SS

GGGGG
SSSS






S

TTS

STT



BT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DMDAAKWKPNLKIKELRLHREARLDQWEGKAGLVWRVASSTKKEEIGEQDCYALSQIINLTDPFTLTATL
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Known secondary structure (DSSP) TBGGGGS


S
S


TTTTSS





TTTS
GGGSB
GGG

TTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence PKGKWKLLRMGHTATGHTNATAGGGKGLECDKFNPKAVRKQFDNWFAQAFVKTNPDVARRVLKYMHVDSW
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Known secondary structure (DSSP)


B
TT
STT

BBB
TT
TTGGGGTSS



 .........430.........440.........450.........460.........470.........480.........490
Sequence ECGSQNWSDTFAAEFRKRRGYDLMPYLPLLAGIPMESAERSEKILRDVRTTIGELVVDVFYQVLADCAKE
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Known secondary structure (DSSP)
S



B
TTSS
SGGGGGGGGT

BS
T
 .........500.........510.........520.........530.........540.........550.........560
Sequence YDCQFSAECVAPTMVSDGLLHYQKVDLPMGEFWLNSPTHDKPNDMLDAISGAHIYGKNIIQAEGFTEVRG
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Known secondary structure (DSSP) TT



TTTSSSBTTGGGGG
SSS
TTT

TT



BSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence TWNEHPGILKALLDRNYALGINRLFFHVYVHNPWLDRKPGMTLDGIGLFFQRDQTWWNKGAKAFCEYITR
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Known secondary structure (DSSP)
S


GGGTT





TTS

BTTBB


STTSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence CQSLLQYGHPVADIAVFTGEEMPRRSILPERLVPSLPGIFGAERVESERIRLANEGQPLRVRPVGVTHSA
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Known secondary structure (DSSP) TSS




S
SSB



GGGGTTT


TT


STT
T
 .........710.........720.........730.........740.........750.........760.........770
Sequence NMSDPEKWVNPLRGYAYDSFNKDALLRLAKAENGRMTLPGGASYKVLVLPLPRPMNPDPAALSPEVKQKI
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Known secondary structure (DSSP) TS

GGG
SSTTSS


T
TT
TTS
S



BTTBSS




 .........780.........790.........800.........810.........820.........830.........840
Sequence NELKEAGILIPSLPYKEDDFSSYGLERDLIVPENIAWTHRQGEQGDIYFIANQLEETRTFTASMRIDGRK
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Known secondary structure (DSSP) TT
B


SS

SSSBGGGTB

S

SSTT
SSS
S

S

 .........850.........860.........870.........880.........890.........900.........910
Sequence PECWNPVTGEINADIPYEQKSHRTEITLTLAPNESVFIVYPATGLEATEYTVTFTANGKTIQRQELFDWS
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Known secondary structure (DSSP)

TTT






TT
TT


B




TTTTSS


GG
 .........920.........930.........940.........950.........960.........970.........980
Sequence KEEDEQIRYYSGTAVYKTTFRWKSKVKEDQQVYLNLGKVCDLATVRVNGIDCGTIWTAPYRADITAALKK
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Known secondary structure (DSSP) G
SST

S
S


TT

BSTT
SSS

TTT

S
 .........990.........1000.........1010.........1020.........1030........
Sequence GVNELEIEVTNTWANALKGADEGKAPFDGIWTNAKYRRAENTLLPAGLLGPLNFDVAN
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Known secondary structure (DSSP)

TTT

SSS
S




TT









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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