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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mqcC_

Fold library idPDB HeaderMoleculeTitle
c5mqcC_3.40PDB header: virusChain: C: PDB Molecule: vp3;


Added to library: Thu Feb 9 19:20:10 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SKPLLPIANPTVLRPANTFAITDTNDMSHSLALSNDTNVPFVKALDGSGLDEMSFDYLKKIPQFIQSKFF
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Known secondary structure (DSSP)













SS

TT
SSS






SSSTT







TTSSSS
TT
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence TTTTKPQEVLFQTKVMPHYFVPGGDVTVAMDKDITRTIWQPSHLAYITSMFKYWTGSLVYTFKFVKTDYH
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Known secondary structure (DSSP)
TT

TT
S
S

B
SS


SSS


B
TTT
SS



TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SGRVEVSFHPFSDYTTGTYSDYTYRIIVDLREKSEFSVTIPFISPVPYKRISRPDWDKPYSKYAHASTGT
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Known secondary structure (DSSP) B
SSS


TT

GGGS

SS





SSSS




TT

SSSSTTT
S
 .........220.........230.........240.........250.........260
Sequence LVLKALTSLKATNTVVSNSVEILIEVNAGDDFNVIAPIENIFFPFSLSPG
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Known secondary structure (DSSP) SS

B

TTTS
S


SS





S









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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