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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mqcB_

Fold library idPDB HeaderMoleculeTitle
c5mqcB_3.40PDB header: virusChain: B: PDB Molecule: vp2;


Added to library: Thu Feb 9 18:56:46 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MAEQINENYENKQQLVEQTEITTFENDLIVLEDGPQMEESLPFAFHGQHTDNRQHTVVNFLQRPQVIFDS
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Known secondary structure (DSSP)






SS



SSTT
SS





SSS




TTTS
SSS
SS


SSTTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SWASDVPRNKQFMDSIMIPDDIISFPMFAEKLKGFSSLRATAVITVQFQTQPFQAGRVMLGSFPLPTLNP
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Known secondary structure (DSSP)
SSS
TTSTTSTTBS


TT


S
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TRVKFATNHVSRLMLLNHVQCDIAKETEVSLRIPFVSPYNSYDLVSKRFPWAKVVGLVYSPLTTTIPVDF
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Known secondary structure (DSSP) SSTTTSTTSTTT
S



SSSSTTTTB




SSSS
 .........220.........230.
Sequence IVYGHFEDVELGCPTSGMLAQ
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Known secondary structure (DSSP)

B







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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