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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mqcA_

Fold library idPDB HeaderMoleculeTitle
c5mqcA_3.40PDB header: virusChain: A: PDB Molecule: vp1;


Added to library: Thu Feb 9 19:21:43 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNSGTEQQNPRGSSLLTDPESITKSDPYNPNISLLISGEVFTNFRNLIKRVNFRKATTLNGKRISDTFDI
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Known secondary structure (DSSP)



SS
SS
TT




TTSS






TSS



TT


SS
SBS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence NSLIEAPRLDIAQYVDTETKEAKYGFSYFWSAPTTLNIVAEMYALYRGGVRVKVVTEKGVDFVRATVSPQ
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Known secondary structure (DSSP) GGGTS




TTT

TTB


TTBSS

TT


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence QTYGSDVAPTTHISTPLAIEQIPIKGVAEFQIPYYAPCLSSSFRANSETFYYSSGRNNLDIATSPPSINR
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Known secondary structure (DSSP)

TT
SS

S

SSS

GGGSSS



SSSS
S




SS
SS


S
BS
 .........220.........230.........240.........250.........260.........270.........280
Sequence YYAVGAGDDMDFSIFIGTPPCIHASQTAQFTKIKQGKVYDLRYDQYDPFREVQDGTAFLNARSIEDSDLL
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Known secondary structure (DSSP)
TT


B







GGGGT
TTS
S
STTS



B


S

GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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