Fold library entry viewer: c5mpeZ_

Added to library: Tue Mar 14 10:12:35 2017
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	V	D	E	S	D	K	K	Q	Q	T	I	D	E	Q	S	Q	I	S	P	E	K	Q	T	P	N	K	K	D	K	K	K	E	E	E	E	Q	L	S	E	E	D	A	K	L	K	T	D	L	E	L	L	V	E	R	L	K	E	D	D	S	S	L	Y	E	A	S	L	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	T	T	S	S	T												S	T	T											S							T	T	T														T	T		S					T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	K	E	S	I	K	N	S	T	S	S	M	T	A	V	P	K	P	L	K	F	L	R	P	T	Y	P	D	L	C	S	I	Y	D	K	W	T	D	P	N	L	K	S	S	L	A	D	V	L	S	I	L	A	M	T	Y	S	E	N	G	K	H	D	S	L	R	Y	R	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S		S		S	S	S					T	T		S	S	S									T	T	S																					T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	D	V	S	D	F	E	G	W	G	H	E	Y	I	R	H	L	A	L	E	I	G	E	V	Y	N	D	Q	V	E	K	D	A	E	D	E	T	S	S	D	G	S	K	S	D	G	S	A	A	T	S	G	F	E	F	S	K	E	D	T	L	R	L	C	L	D	I	V	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S			T	T																T							S			T	T	T	S	T	T	T					S	G	G	G	T														S		S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	L	K	H	N	G	E	E	D	A	V	D	L	L	L	E	I	E	S	I	D	K	L	P	Q	F	V	D	E	N	T	F	Q	R	V	C	Q	Y	M	V	A	C	V	P	L	L	P	P	P	E	D	V	A	F	L	K	T	A	Y	S	I	Y	L	S	Q	N	E	L	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T																T	T	T	T	S																T	S	T	T																				S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	I	A	L	A	V	R	L	G	E	E	D	M	I	R	S	V	F	D	A	T	S	D	P	V	M	H	K	Q	L	A	Y	I	L	A	A	Q	K	T	S	F	E	Y	E	G	V	Q	D	I	I	G	N	G	K	L	S	E	H	F	L	Y	L	A	K	E	L	N	L	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T														T	T		S	S														T		S	S									S							S		S								T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	K	V	P	E	D	I	Y	K	S	H	L	D	N	S	K	S	V	F	S	S	A	G	L	D	S	A	Q	Q	N	L	A	S	S	F	V	N	G	F	L	N	L	G	Y	C	N	D	K	L	I	V	D	N	D	N	W	V	Y	K	T	K	G	D	G	M	T	S	A	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																									S	S	T													T		S	S								T							T	S		S	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	I	G	S	I	Y	Q	W	N	L	D	G	L	Q	Q	L	D	K	Y	L	Y	V	D	E	P	E	V	K	A	G	A	L	L	G	I	G	I	S	A	S	G	V	H	D	G	E	V	E	P	A	L	L	L	L	Q	D	Y	V	T	N	P	D	T	K	I	S	S	A	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	T	T		S	T	T									T	S	S																T	T	S	S	S	S	S		S	S												S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	G	L	G	I	A	F	A	G	S	K	N	D	E	V	L	G	L	L	L	P	I	A	A	S	T	D	L	P	I	E	T	A	A	M	A	S	L	A	L	A	H	V	F	V	G	T	C	N	G	D	I	T	T	S	I	M	D	N	F	L	E	R	T	A	I	E	L	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T											S	S					S	S				G	G	G	T											S	S	S						S															S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	W	V	R	F	L	A	L	A	L	G	I	L	Y	M	G	Q	G	E	Q	V	D	D	V	L	E	T	I	S	A	I	E	H	P	M	T	S	A	I	E	V	L	V	G	S	C	A	Y	T	G	T	G	D	V	L	L	I	Q	D	L	L	H	R	L	T	P	K	N	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T		S	S	S	T	T							T	T	S																	T	T	T		T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	E	E	D	A	E	I	K	S	E	E	K	K	G	K	S	S	D	K	D	A	T	T	D	G	K	N	D	D	E	E	E	E	K	E	A	G	I	V	D	E	L	A	Y	A	V	L	G	I	A	L	I	A	L	G	E	D	I	G	K	E	M	S	L	R	H	F	G	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	M	H	Y	G	N	E	H	I	R	R	M	V	P	L	A	M	G	I	V	S	V	S	D	P	Q	M	K	V	F	D	T	L	T	R	F	S	H	D	A	D	L	E	V	S	M	N	S	I	F	A	M	G	L	C	G	A	G	T	N	N	A	R	L	A	Q	L	L	R	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T		S			S	S												S	S		S										T	T	S	S	T	T	T																S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	S	Y	Y	S	R	E	Q	D	A	L	F	I	T	R	L	A	Q	G	L	L	H	L	G	K	G	T	M	T	M	D	V	F	N	D	A	H	V	L	N	K	V	T	L	A	S	I	L	T	T	A	V	G	L	V	S	P	S	F	M	L	K	H	H	Q	L	F	Y	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T						S	S		S	S	S	S	S				S	S	S						T	T	S	S				S	S	G	G	G	G	G	G														S	S						S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.
Sequence	N	A	G	I	R	P	K	F	I	L	A	L	N	D	E	G	E	P	I	K	V	N	V	R	V	G	Q	A	V	E	T	V	G	Q	A	G	R	P	K	K	I	T	G	W	I	T	Q	S	T	P	V	L	L	N	H	G	E	R	A	E	L	E	T	D	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S		S	S					S	S						S	S					S	T	T	T								T	T	T	T								S	S		S

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PDB structure

FASTA sequence

Hidden Markov model

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