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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mpeP_

Fold library idPDB HeaderMoleculeTitle
c5mpeP_4.50PDB header: hydrolaseChain: P: PDB Molecule: 26s proteasome regulatory subunit rpn5;


Added to library: Tue Mar 14 10:08:41 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSRDAPIKADKDYSQILKEEFPKIDSLAQNDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRN
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Known secondary structure (DSSP)



STT
TT


STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KWDDLNEQLTLLSKKHGQLKLSIQYMIQKVMEYLKSSKSLDLNTRISVIETIRVVTENKIFVEVERARVT
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Known secondary structure (DSSP) TTTT

TTT


SS

ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence KDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKN
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Known secondary structure (DSSP) TT



S

T
TTS
STGGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIKSDEAKWKPVLSHIVYFLVLSPYGNLQNDL
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Known secondary structure (DSSP) TTSTT
S
S
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IHKIQNDNNLKKLESQESLVKLFTTNELMRWPIVQKTYEPVLNEDDLAFGGEANKHHWEDLQKRVIEHNL
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Known secondary structure (DSSP)
GGGGG
STS
S


TTTTTTSSSSSSSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence RVISEYYSRITLLRLNELLDLTESQTETYISDLVNQGIIYAKVNRPAKIVNFEKPKNSSQLLNEWSHNVD
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Known secondary structure (DSSP)
ST

TS



TTSS




 .........430.........440
Sequence ELLEHIETIGHLITKEEIMH
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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