Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mpaL_

Fold library idPDB HeaderMoleculeTitle
c5mpaL_4.50PDB header: hydrolaseChain: L: PDB Molecule: 26s protease subunit rpt4;


Added to library: Tue Mar 14 10:40:55 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EQEAHNKALNQFKRKLLEHRRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYI
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP)

SSSSSTTTT





SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTE
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
SSS

SSS
TTT

TT

SSS





STTT

TT


S
SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGE
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) T
T







SSSS
TT
SGGGS

SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATN
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) S
S
TTSS


S

SS
SSSS


TT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence RPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEA
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) STTSS
TTTS
TTSSS

S

SSSSS
BSS

TTT
S

SS
 .........360.........370.........380........
Sequence GFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQK
Predicted secondary structure











SS confidence





































Known secondary structure (DSSP) TTT
SSB
TS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D