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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mp7C_

Fold library idPDB HeaderMoleculeTitle
c5mp7C_2.40PDB header: transferaseChain: C: PDB Molecule: ribose-phosphate pyrophosphokinase;


Added to library: Sat Apr 29 08:19:12 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KNLMLFAGRAHPELADQVAKELDVAVTAQTARDFANGEIFVRFDESVRGCDAFVLQSHPAPLNQWLMEQL
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Known secondary structure (DSSP)


SS
T

B


TTS
SS

TT




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IMIDALKRGSAKRITAILPFYPYARQDKKHRGREPISARLVADLLKTAGADRIVSVDLHTDQIQGFFDGP
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Known secondary structure (DSSP) TT
SSS
TTTT
SS
SSSS


T
SS
SSGGGGGGSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VDHMRAQKLLTGYIGEHYADEDMVVVSPDSGRVRVAEKWADSLGGVPLAFIHKTRSNRVVGDVKGKTCIL
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Known secondary structure (DSSP)

TTS
SSGGGTTS




S

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TDDMIDTGGTIAGAVNLLREDGAKDVIIAATHGVLSDPAPQRLAECGAREVIVTNTLPITEDKRFPQLTV
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Known secondary structure (DSSP) SSSTT
S


TTSS
SBSS


GGG

TT
 .........290........
Sequence LSIAPLLANTIRAVFENG
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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