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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mg3D_

Fold library idPDB HeaderMoleculeTitle
c5mg3D_14.00PDB header: chaperoneChain: D: PDB Molecule: protein translocase subunit secd;


Added to library: Thu Feb 9 11:45:06 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLNRYPLWKYVMLIVVIVIGLLYALPNAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTAR
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Known secondary structure (DSSP)



S
TTSS



GGGSTTS

S



SSSS



SS
S

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQDEYNQ
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Known secondary structure (DSSP) TT





B
B

S



TTTTTTT


S




SB



SS


SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRI
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Known secondary structure (DSSP)

TTT




SS

SSS






S
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLI
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Known secondary structure (DSSP)




SS











SS
S
S


TTG
 .........290.........300.........310.........320.........330.........340.........350
Sequence ATSALIANLILIVGIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRG
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Known secondary structure (DSSP) GG


S


TT

STT
 .........360.........370.........380.........390.........400.........410....
Sequence AFSSIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKK
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Known secondary structure (DSSP) SS

TTTSS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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