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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mf1B_

Fold library idPDB HeaderMoleculeTitle
c5mf1B_3.30PDB header: membrane proteinChain: B: PDB Molecule: fusion protein hap2/gcs1;


Added to library: Tue Mar 14 10:22:27 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VIASGRLEKCVVDGVTEELDCQEKVVVTLTVGNGQSLQTEALEFSLAPLRVSLTKSPLWASYPLQYLSSF
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Known secondary structure (DSSP)

B


TTT


TT

S







 .........80.........90.........100.........110.........120.........130.........140
Sequence NWKPLEVILRPSNKVCKDGDWEDSPTCGWFSVRVADSQGFCCECTRANLDCDPVSAHCLTFDPQWYSGYE
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Known secondary structure (DSSP) S



SSS




TT
SS
SS






TTTT









S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LGAASLQFEIAITVEVREVLHLGPSVPLASSASRLLSAKLLGDLAMYTQLPAISNQVLMVPQPPATNRSA
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SS

TT


SS


S
TTS




TTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence WMLLDKTMLSMDGLACDKVGTGFSAFRYQPSGCGRAPQACLSGQLKDLWEADLARIADGRVPLYMITRFT
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Known secondary structure (DSSP)

GGG

SSS
SSSSTT

TT
SSSTTS
TTSS

S
TT


SSBGGGTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GGSDTTLQSFSGGPLSFALPVTSHSQSLVTLSVAADGVRLVTNRSPGKITGAAVCRFAGTSCGGFEAVAA
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Known secondary structure (DSSP) TS
ST

S
TT


S


SS






GGGS
BSTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RGYIYVNITNTGRLDSDYTLTVSNCSSNVRPIEARTLAVRAGSAASLDPPMELYVEDQAAAAARTCTVSL
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Known secondary structure (DSSP)

SSS
S

TTB





SS

SS

BSS


 .........430.........440.
Sequence YDSVGAVTDSLTLSFYTNATQ
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Known secondary structure (DSSP) TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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