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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mduA_

Fold library idPDB HeaderMoleculeTitle
c5mduA_1.02PDB header: transcriptionChain: A: PDB Molecule: rpb7-binding protein seb1;


Added to library: Sat Apr 15 08:52:01 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TRRFERDPTIPPDSIKVYSRTLFLGGITRSVREPVLRSMFERFGSVQSLILNHNYRHGFLKMFRRDAAEK
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Known secondary structure (DSSP)



TTS
TT




TTS
TTS
GGGTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AQVAMENVPFADTTIRTKWGVGFGPRECSDFSTGISVIPIRLLTDADRTWLVTAEYGGTGGLPITPGIAL
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Known secondary structure (DSSP) TSSTT


SS
GGGTTTTGGG


SSSTTSS



SS
 .........150...
Sequence DEPDIEIGLGISS
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Known secondary structure (DSSP)



SS


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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