Fold library entry viewer: c5mdnB_

Added to library: Thu Feb 9 19:03:38 2017
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	F	W	P	L	D	A	T	Y	S	V	V	G	G	V	P	E	V	R	V	F	G	V	D	G	E	G	R	R	V	V	L	V	D	R	R	F	R	P	Y	F	Y	A	K	C	D	K	C	D	A	S	L	A	K	S	Y	L	S	R	V	A	P	V	E	A	V	E	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B											S	S	S	S										T	T	S									S										S	S											T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	R	R	F	F	G	R	P	T	I	F	L	K	V	V	A	K	V	P	E	D	V	R	K	L	R	E	A	A	L	G	A	P	G	V	V	D	V	Y	E	A	D	I	R	Y	Y	M	R	Y	M	I	D	K	G	V	V	P	C	A	W	N	V	V	E	A	R	E	A	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T											S	S	G	G	G									T		S	S	S						S		S												T			T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	G	P	L	P	L	Y	E	V	V	E	W	A	G	V	E	E	G	F	P	P	P	L	R	V	L	A	F	D	I	E	V	Y	N	E	R	G	S	P	D	P	L	R	D	P	V	V	M	L	A	V	K	T	S	D	G	R	E	E	V	F	E	A	E	G	R	D	D	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																																S	S	S	S			T	T	T	S										S	S	S								B	T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	I	R	G	F	V	D	F	V	K	E	F	D	P	D	V	I	V	G	Y	N	S	N	G	F	D	W	P	Y	L	S	E	R	A	K	A	L	G	V	P	L	R	V	D	R	L	G	G	V	P	Q	Q	S	V	Y	G	H	W	S	V	V	G	R	A	N	V	D	L	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S					S	S	T	T	T	T													T						S	T	T	S							G	G	G				B	T	T	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	V	D	E	F	P	E	I	K	V	K	T	L	D	R	V	A	E	Y	F	G	V	M	K	R	S	E	R	V	L	I	P	G	H	K	V	Y	E	Y	W	N	D	P	A	K	R	P	T	L	M	R	Y	V	L	D	D	V	R	S	T	L	G	L	A	E	K	L	L	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		T	T		S	S										T	T	S			S	T	T	S					G	G	G						S		T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	I	Q	L	S	S	V	S	G	L	P	L	D	Q	V	A	A	A	S	V	G	N	R	V	E	W	M	L	L	R	Y	A	Y	R	M	G	E	V	A	P	N	R	E	E	R	E	Y	E	P	Y	K	G	A	I	V	L	E	P	K	P	G	L	Y	S	D	V	L	V	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T								T	T	S																	T	T	B																							S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	S	S	M	Y	P	N	I	M	M	K	Y	N	L	S	P	D	T	Y	L	E	P	H	E	P	D	P	P	E	G	V	V	V	A	P	E	V	G	H	R	F	R	K	A	P	T	G	F	I	P	A	V	L	K	H	L	V	E	L	R	R	A	V	R	E	E	A	K	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									T	T			G	G	G	B			S						T	T						T	T	T							S	S																						G	G	G	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	P	D	S	P	E	Y	R	L	L	D	E	R	Q	R	A	L	K	V	M	A	N	A	M	Y	G	Y	L	G	W	V	G	A	R	W	Y	K	K	E	V	A	E	S	V	T	A	F	A	R	A	I	L	L	D	V	V	E	Y	A	K	R	L	G	I	E	V	I	Y	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S																			T								T	T	S	T	T																												T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	D	S	L	F	V	K	K	S	G	A	V	D	R	L	V	K	Y	V	E	E	R	H	G	I	E	I	K	V	D	K	D	Y	E	R	V	L	F	T	E	A	K	K	R	Y	A	G	L	L	R	D	G	R	I	D	I	V	G	F	D	W	C	E	L	A	K	E	V	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S								T	T																													S	S	S	S							T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	N	V	V	E	L	I	L	K	S	K	S	V	G	E	A	R	E	R	V	V	K	Y	V	R	E	V	V	E	R	L	K	A	Y	K	F	D	L	D	D	L	I	I	W	K	T	L	D	K	E	L	D	E	Y	K	A	Y	G	P	H	V	H	A	A	L	E	L	K	R	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S																					T	T				G	G	G	G		B						S		T	T	S	S				S						T	T	G	G	G	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.
Sequence	Y	K	V	G	K	G	T	T	V	G	Y	V	I	V	R	G	P	G	K	V	S	E	R	A	M	P	Y	I	F	V	D	D	A	S	K	V	D	V	D	Y	Y	I	E	K	Q	V	I	P	A	A	L	R	I	A	E	V	L	G	V	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S								B		S	S	S		T	T	T	T				T	T	S			S	S	T	T	B								T	T							T	T		S	S			S

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PDB structure

FASTA sequence

Hidden Markov model

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