Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mc9A_

Fold library idPDB HeaderMoleculeTitle
c5mc9A_2.13PDB header: cell adhesionChain: A: PDB Molecule: laminin subunit alpha-1;


Added to library: Sat Feb 11 11:20:25 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EMQANLLLDRLKPLKTLEENLSRNLSEIKLLISRARKQAASIKVAVSADRDCIRAYQPQTSSTNYNTLIL
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)

TTTTTGGGT


S






SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NVKTQEPDNLLFYLGSSSSSDFLAVEMRRGKVAFLWDLGSGSTRLEFPEVSINNNRWHSIYITRFGNMGS
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)
S
S

SS


TTSSS
TT



SSS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LSVKEASAAENPPVRTSKSPGPSKVLDINNSTLMFVGGLGGQIKKSPAVKVTHFKGCMGEAFLNGKSIGL
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) TT

S




SSS






TT
SSS

SSS


TT








TT

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence WNYIEREGKCNGCFGSSQNEDSSFHFDGSGYAMVEKTLRPTVTQIVILFSTFSPNGLLFYLASNGTKDFL
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP) T

SS



S



TT





TT


SS

SS


 .........290.........300.........310.........320.........330.........340.........350
Sequence SIELVRGRVKVMVDLGSGPLTLMTDRRYNNGTWYKIAFQRNRKQGLLAVFDAYDTSDKETKQGETPGAAS
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TTSSS

SS

TTSS
TTTT
SSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence DLNRLEKDLIYVGGLPHSKAVRKGVSSRSYVGCIKNLEISRSTFDLLRNSYGVRKGCALEPIQSVSFLRG
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)




TT

SB

TTS


TT


SB
TT

TTSSS






 .........430.........440.........450.........460.........470.........480.........490
Sequence GYVEMPPKSLSPESSLLATFATKNSSGILLVALGKDAHVPFFSIMLLEGRIEVHVNSGDGTSLRKALLHA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)



B
TT
SSS





S
TT
SSS




 .........500.........510.........520.........530.........540.........550.........560
Sequence PTGSYSDGQEHSISLVRNRRVITIQVDENSPVEMKLGPLTEGKTIDISNLYIGGLPEDKATPMLKMRTSF
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) SSS
S
SSS
TTTTS



GGGTT

B

SSS

TT


TT




B
 .........570.........580.........590.......
Sequence HGCIKNVVLDAQLLDFTHATGSEQVELDTCLLAEEPM
Predicted secondary structure
















SS confidence




































Known secondary structure (DSSP)
TT

GGG
ST


SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D