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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5m59F_

Fold library idPDB HeaderMoleculeTitle
c5m59F_3.20PDB header: splicingChain: F: PDB Molecule: putative pre-mrna splicing factor;


Added to library: Fri Feb 10 03:24:32 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KTEWRTRAIATSNLRTRANNMYVAPVDNDVDDITYVMPKNILKKFITIADLRVQVAGFLYGCSPADNDQV
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Known secondary structure (DSSP)


TGGGGS





SS

S
SSS



SS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEIRCIVMVPQIGGNRSVQLPQHLPQHEMLKGLEPLGLIHTMNELPYMSPADVTTHAKLVDAHPSWKNQN
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Known secondary structure (DSSP)
SB
SS


SS



GGGTT




SS


SSS
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TLTVTVAFTPGSVSLSAWALTPLGYKWGVENKDPNVDNPQGFTTTMGERRQLLLSDKFKGFFLVPDTGKW
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Known secondary structure (DSSP)
TT
T

S

SSS
TT

TTS
SS

TTS

 .........220.........230.........240.........250.........260.....
Sequence NYSFMGSSFSGIEKKPYHVKLDTPLPFYSEQHRPIHFTSFNELEDIWVDRADNFA
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Known secondary structure (DSSP) B
SS
TTS



S



TT
TTT
GGGG



S




S



S


Download:PDB structure FASTA sequence

Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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