Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5m4aA_

Fold library idPDB HeaderMoleculeTitle
c5m4aA_2.90PDB header: hydrolaseChain: A: PDB Molecule: neutral trehalase;


Added to library: Sat Nov 4 08:28:14 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPVNRLSRLINTQFWNSLTRRVDLNNVGEIAKDTKIDTPGAKNPRIYVPYDCPEQYEFYVQASQMHPSLK
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
T


TTTTTTTT


S

SGGGSS

TT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LEVEYLPKKITAEYVKSVNDTPGLLALAMEEHFNPSTGEKTLIGYPYAVPGGRFNELYGWDSYMMALGLL
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)


SS

TTTS





TTT





BTTB
S
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence EANKTDVARGMVEHFIFEINHYGKILNANRSYYLCRSQPPFLTEMALVVFKKLGGRSNPDAVDLLKRAFQ
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TT
SS

SBSBGGGTT





TTGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence ASIKEYKTVWTASPRLDPETGLSRYHPNGLGIPPETESDHFDTVLLPYASKHGVTLDEFKQLYNDGKIKE
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TTTSTTTB
TTT

B






SS
TTS
TTTTTTS
TT



 .........290.........300.........310.........320.........330.........340.........350
Sequence PKLDEFFLHDRGVRESGHDTTYRFEGVCAYLATIDLNSLLYKYEIDIADFIKEFCDDKYEDPLDHSITTS
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TT

S
TTTTTTTTS
TTT

TTT


 .........360.........370.........380.........390.........400.........410.........420
Sequence AMWKEMAKIRQEKITKYMWDDESGFFFDYNTKIKHRTSYESATTFWALWAGLATKEQAQKMVEKALPKLE
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TB
TTT

B

TTTT



BGGGGT
S
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence MLGGLAACTERSRIRQWDYPFGWAPHQILAWEGLRSYGYLTVTNRLAYRWLFMMTKAFVDYNGIVVEKYD
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TT
SB
TTT


SSSTT
TT

TTS


S
 .........500.........510.........520.........530.........540........
Sequence VTRGTDPAATEGFGWVNASYILGLKYMNSHARRALGACIPPISFFSSLRPQERNLYGL
Predicted secondary structure



























SS confidence

























































Known secondary structure (DSSP) TTS




TTS

TT

TT

S
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D