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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5m30C_

Fold library idPDB HeaderMoleculeTitle
c5m30C_2.60PDB header: secretion systemChain: C: PDB Molecule: type vi secretion protein;


Added to library: Sat Jun 24 08:28:08 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FQQQAAWDVHLADSVARMGLAHPWGVVAAEFDDSLLPLSRLNATRLIVRFPDGTLIDTERADNLPPVCDL
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Known secondary structure (DSSP)
TTT
S



TTTTTT
TTS
TTTT





G
 .........80.........90.........100.........110.........120.........130.........140
Sequence STVSDRSLVDIVLALPLLNANGGNLDNGSESERPRRWKSEAVLRHNLTLRMAHQENAAWLTCPVTRLVRD
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Known secondary structure (DSSP) GGGTT
S


SSS

B

SS

SS

S




TTS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AQGQWCRDPRFIPPLLTLSASPSLMTELLELLHHLQARRQRLMSMRRENNARLADFAVADVSLFWLLNAL
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Known secondary structure (DSSP) TT


TT



BSSGGG
S

SS



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NSAEPVLKELLDMPYRHPELLYRELARLAGSLLTFSLEHNVDAVPAYHHETPENVFPPLLSLLNRLLEAS
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Known secondary structure (DSSP) S

S
TT
SSS
GGGS



SS
GGGT
 ..
Sequence LP
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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