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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5m30A_

Fold library idPDB HeaderMoleculeTitle
c5m30A_2.60PDB header: secretion systemChain: A: PDB Molecule: type vi secretion protein;


Added to library: Sat Jun 24 08:27:19 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FQQQAAWDVHLADSVARMGLAHPWGVVAAEFDDSLLPLSRLNATRLIVRFPDGTLIDTERADNLPPVCDL
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Known secondary structure (DSSP)
TTT
S


GGGTTTT
TTS
TTTT





G
 .........80.........90.........100.........110.........120.........130.........140
Sequence STVSDRSLVDIVLALPLLNANGGNLDNGSESERPRRWKSERVLRHNLTLRMAHQENAAWLTCPVTRLVRD
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Known secondary structure (DSSP) GGGTT
S


SSS


SS

SS

S




TTS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AQGQWCRDPRFIPPLLTLSASPSLMTELLELLHHLQARRQRLMSMRRARLADFAVADVSLFWLLNALNSA
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Known secondary structure (DSSP) TT


TT



BSSGGG
T



S



 .........220.........230.........240.........250.........260.........270.........280
Sequence EPVLKELLDMPYRHPELLYRELARLAGSLLTFSLEHNVDAVPAYHHETPENVFPPLLSLLNRLLEASLPS
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Known secondary structure (DSSP) S

S
TTSS
TT

GGGS



SS
GGGTT



 ....
Sequence RVVF
Predicted secondary structure



SS confidence



Known secondary structure (DSSP) SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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