Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5m1hA_

Fold library idPDB HeaderMoleculeTitle
c5m1hA_UNKPDB header: viral proteinChain: A: PDB Molecule: gag protein;


Added to library: Thu Feb 9 17:24:06 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PIGTVIPIQHIRSVTGEPPRNPREIPIWLGRNAPAIDGVFPVTTPDLRCRIINAILGGNIGLSLTPGDCL
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

S



TTS

S
TTT



SSS
SS



TTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TWDSAVATLFIRTHGTFPMHQLGNVIKGIVDQEGVATAYTLGMMLSGQNYQLVSGIIRGYLPGQAVVTAL
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) STT

SSSTT
TS
TT
SS
 .........150.........160.........170.........180
Sequence QQRLDQEIDDQTRAETFIQHLNAVYEILGLNARGQSIRLE
Predicted secondary structure












SS confidence







































Known secondary structure (DSSP) SSSTT
SSSS


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D