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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lweB_

Fold library idPDB HeaderMoleculeTitle
c5lweB_2.80PDB header: membrane proteinChain: B: PDB Molecule: c-c chemokine receptor type 9;


Added to library: Thu Feb 9 11:43:17 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NFEDFYCEKNNVRQFASHFLPPLYWLVFIVGALGNSLVILVYWYCARAKTATDMFLLNLAIADLLFLVTL
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Known secondary structure (DSSP)
S


S
S


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence PFWAIAAATFMCKVVNSMYKMNFYSCVLLIMCICVDRYIAIAQAMRAHTWREKRLLYSKMVCFTIWVLAA
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TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ALCIPEILTKLKSAVLALKVILGFFLPFVVMACCYTIIIHTLIQAKKSSKHKALKATITVLTVFVLSQFP
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Known secondary structure (DSSP)

T

STTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YNCILLVQTIDAYAMFISNCAVSTAIDICFQVTQAIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGAIS
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Known secondary structure (DSSP)




GGGT
SS
 .....
Sequence QAAAH
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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