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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lqzH_

Fold library idPDB HeaderMoleculeTitle
c5lqzH_7.00PDB header: hydrolaseChain: H: PDB Molecule: atp synthase delta subunit;


Added to library: Thu Feb 9 16:57:34 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence KVSLVAPHQAIFTNKEVSQVNLPASSGEMGVLANHVPTVEELAPGVVEVIESSGTASKYFVSGGFASILP
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Known secondary structure (DSSP)
B

B
SS
BSS
SS


BSSS
SS





SS
TTT



T
 .........80.........90.........100.........110.........120........
Sequence GSKLSISTVEAHPLDAFSSENIKSLLAEAQKNASSADETVAAEAAIEIEVLEALQAAV
Predicted secondary structure






SS confidence

























































Known secondary structure (DSSP) TTS
GGG

TTSSSTTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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