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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lqyW_

Fold library idPDB HeaderMoleculeTitle
c5lqyW_7.80PDB header: hydrolaseChain: W: PDB Molecule: atp synthase subunit d;


Added to library: Thu Feb 9 11:35:26 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence LDWTKIVSKLGLSGQTAAALTSFKKRNDEAKRILFELKQQPSNVDFAFYKSTLKNTAIVDKIQSDVSKFT
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Known secondary structure (DSSP)


TTTTT
S
S
STTS
SS





TTTTTT
SSTTSTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence PSKANLSKQLNLIESFEAKALENAKETESVVLAELTDLEKTLENIESXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

S


S


TTGGGGTTT


 .....
Sequence XXXXX
Predicted secondary structure


SS confidence




Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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