PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5lqwC_

Fold library id	PDB Header	Molecule	Title
c5lqwC_	5.80	PDB header: splicing	Chain: C: PDB Molecule: pre-mrna-splicing helicase brr2;

Links to external resources
Added to library: Thu Feb 9 17:45:47 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S N V E T Y E Q I L Q W V T E V L G N D I P H D L I I G T A D I F I R Q L K E N E E N E D G N I E E R K E K I Q H E L G I N I D S L K F N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
T T
S S S T T
S T T T T T T T T T
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L V K L M K N E N D I I K L S D S K T N P A I P P V I D L E K I K F D E S S K L M T V T K V S L P E G S F K R V K P Q Y D E I H I P A P S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S
S
S
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P V I D Y E L K E I T S L P D W C Q E A F P S S E T T S L N P I Q S K V F H A A F E G D S N M L I C A P T G S G K T N I A L L T V L K A L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B S T T S
T T S
S S S
S B
S
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence H H Y N P K T K K L N L S A F K I V Y I A P L K A L V Q E Q V R E F Q R R L A F L G I K V A E L T G D S R L S R K Q I D E T Q V L V S T P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B
S S S S S B
S T T
S
T T T T
S T T T G G G S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence K W D I T T R N S N N L A I V E L V R L L I I D E I H L L H D D R G P V L E S I V A R T F W A S K Y G Q E Y P R I I G L S A T L P N Y E D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T T G G G G G S S S T T T S S S S S S
S
T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence G R F L R V P K E G L F Y F D S S F R P C P L S Q Q F C G I K E R N S L K K L K A M N D A C Y E K V L E S I N E G N Q I I V F V H S R K E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T
G G G S S S
S S T
S S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence S R T A T W L K N K F A E E N I T H K L T K N D A G S K Q I L K T E A A N V L D P S L R K L I E S G I G T H H A G L T R S D R S L S E D L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T S S
T T T T T
S
T T
T T S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence A D G L L Q V L V C T A T L A W G V N L P A H T V I I K G T D V Y S P E K G S W E Q L S P Q D V L Q M L G R A G R P R Y D T F G E G I I I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S T S
B S
T T T T
T T B S
T T T
S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence D Q S N V Q Y Y L S V L N Q Q L P I E S Q F V S K L V D N L N A E V V A G N I K C R N D A V N W L A Y T Y L Y V R M L A S P M L Y K V P D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T S
S
T T G G G T T
S S S
S
T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence S S D G Q L K K F R E S L V H S A L C I L K E Q E L V L Y D A E N D V I E A T D L G N I A S S F Y I N H A S M D V Y N R E L D E H T T Q I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T S T S
S S S
T
S T T T T T T G G G
T T
S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence L F R I F S M S E E F K Y V S V R Y E E K R E L K Q L L E K A P I P I R E D I D D P L A K V N V L L Q S Y F S Q L K F E G F A L N S D I V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T
T T T
S S
S
T T S T T
S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence I H Q N A G R L L R A M F E I C L K R G W G H P T R M L L N L C K S A T T K M W P T N C P L R Q F K T C P V E V I K R L E A S T V P W G D Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T T S
T T T T
T T
T S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence L Q L E T P A E V G R A I R S E K Y G K Q V Y D L L K R F P K M S V T C N A Q P I T R S V M R F N I E I I A D W I W D M N V H G S L E P F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
G G G S S T S
S S S S
T T T S
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence L M L E D T D G D S I L Y Y D V L F I T P D I V G H E F T L S F T Y E L K Q H N Q N N L P P N F F L T L I S E N W W H S E F E I P V S F N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T T S S
S S
S
S S S T T
S S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence F K L P K K F P P P T P L L E N I S I S T S E L G N D D F S E V F E F K T F N K I Q S Q V F E S L Y N S N D S V F V G S G K G T G K T A M A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
B S T T S S
S S
S B
T
S S
T T S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence E L A L L N H W R Q N K G R A V Y I N P S G E K I D F L L S D W N K R F S H L A G G K I I N K L G N D P S L N L K L L A K S H V L L A T P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S
S T T
S
S S S
S S
S S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence Q F E L L S R R W R Q R K N I Q S L E L M I Y D D A H E I S Q G V Y G A V Y E T L I S R M I F I A T Q L E K K I R F V C L S N C L A N A R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T T S
S G G G G G S S T
S
S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence F G E W A G M T K S N I Y N F S P S E R I E P L E I N I Q S F K D V E H I S F N F S M L Q M A F E A S A A A A G N R N S S S V F L P S R K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
B
S S
S S
B
B S S
S S S S
T T
S S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence C M E V A S A F M K F S K A I E W D M L N V E E E Q I V P Y I E K L T D G H L R A P L K H G V G I L Y K G M A S N D E R I V K R L Y E Y G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G S
S S
S
S
S T T T T
S S S
T

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence V S V L L I S K D C S A F A C K T D E V I I L G T N L Y D G A E H K Y M P Y T I N E L L E M V G L A S G N D S M A G K V L I L T S H N M K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S T T T T S
B S
S
B
T T T
S
B
T T B
S S S
B
B

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence Y Y K K F L I E P L P T E S Y L Q Y I I H D T L N N E I A N S I I Q S K Q D C V D W F T Y S Y F Y R R I H V N P S Y Y G V R D T S P H G I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T T T T T S
S S S T
T
S
S S

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence V F L S N L V E T C L N D L V E S S F I E I S T L S N G L I A S H Y G V S F F T I Q S F V S S L S N T S T L K N M L Y V L S T A V E F E S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B S S S B
S S
T T
T
S G G G G

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence P L R K G D R A L L V K L S K R L P L R F P E H T S S G S V S F K V F L L L Q A Y F S R L E L P V D F Q N D L K D I L E K V V P L I N V V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S S
S S S
S S S T
T T

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence D I L S A N G Y L N A T T A M D L A Q M L I Q G V W D V D N P L R Q I P H F N N K I L E K C K E I N V E T V Y D I M A L E D E E R D E I L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T
S
G G G S S T T
T T
S T

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750

Sequence L T D S Q L A Q V A A F V N N Y P N V E L T Y S L N N S D S L I S G V K Q K I T I Q L T R D V E P E N L Q V T S E K Y P F D K L E S W W L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S S
S S
S S
S
B
S S
S
B

. . . . . . . . . 1760 . . . . . . . . . 1770 . . . . . . . . . 1780 . . . . . . . . . 1790 . . . . . . . . . 1800 . . . . . . . . . 1810 .

Sequence L G E V S K K E L Y A I K K V T L N K E T Q Q Y E L E F D T P T S G K H N L T I W C V C D S Y L D A D K E L S F E I N V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S S
S S S
B
T T S S S
B

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	V	E	T	Y	E	Q	I	L	Q	W	V	T	E	V	L	G	N	D	I	P	H	D	L	I	I	G	T	A	D	I	F	I	R	Q	L	K	E	N	E	E	N	E	D	G	N	I	E	E	R	K	E	K	I	Q	H	E	L	G	I	N	I	D	S	L	K	F	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																T	T	S															T	T			S	S	S	T	T		S	T	T	T	T	T	T	T	T	T			S												S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	V	K	L	M	K	N	E	N	D	I	I	K	L	S	D	S	K	T	N	P	A	I	P	P	V	I	D	L	E	K	I	K	F	D	E	S	S	K	L	M	T	V	T	K	V	S	L	P	E	G	S	F	K	R	V	K	P	Q	Y	D	E	I	H	I	P	A	P	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S												S	S																	S			S				S										T	T							S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	V	I	D	Y	E	L	K	E	I	T	S	L	P	D	W	C	Q	E	A	F	P	S	S	E	T	T	S	L	N	P	I	Q	S	K	V	F	H	A	A	F	E	G	D	S	N	M	L	I	C	A	P	T	G	S	G	K	T	N	I	A	L	L	T	V	L	K	A	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S				B	S	T	T	S						T	T	S		S	S	S		S	B														S											T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	H	Y	N	P	K	T	K	K	L	N	L	S	A	F	K	I	V	Y	I	A	P	L	K	A	L	V	Q	E	Q	V	R	E	F	Q	R	R	L	A	F	L	G	I	K	V	A	E	L	T	G	D	S	R	L	S	R	K	Q	I	D	E	T	Q	V	L	V	S	T	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	B		S	S	S	S	S	B		S	T	T								S																	T	T	T	T									S	T	T						T	G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	W	D	I	T	T	R	N	S	N	N	L	A	I	V	E	L	V	R	L	L	I	I	D	E	I	H	L	L	H	D	D	R	G	P	V	L	E	S	I	V	A	R	T	F	W	A	S	K	Y	G	Q	E	Y	P	R	I	I	G	L	S	A	T	L	P	N	Y	E	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G						T							T	T	G	G	G	G	G	S	S	S														T	T	T	S	S	S	S	S	S								S		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	R	F	L	R	V	P	K	E	G	L	F	Y	F	D	S	S	F	R	P	C	P	L	S	Q	Q	F	C	G	I	K	E	R	N	S	L	K	K	L	K	A	M	N	D	A	C	Y	E	K	V	L	E	S	I	N	E	G	N	Q	I	I	V	F	V	H	S	R	K	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			T	T	T						G	G	G	S	S	S													S	S																						T								S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	R	T	A	T	W	L	K	N	K	F	A	E	E	N	I	T	H	K	L	T	K	N	D	A	G	S	K	Q	I	L	K	T	E	A	A	N	V	L	D	P	S	L	R	K	L	I	E	S	G	I	G	T	H	H	A	G	L	T	R	S	D	R	S	L	S	E	D	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S			T	T	T	S	S			T	T	T										T	T		S										T	T						T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	D	G	L	L	Q	V	L	V	C	T	A	T	L	A	W	G	V	N	L	P	A	H	T	V	I	I	K	G	T	D	V	Y	S	P	E	K	G	S	W	E	Q	L	S	P	Q	D	V	L	Q	M	L	G	R	A	G	R	P	R	Y	D	T	F	G	E	G	I	I	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S		S						T					S					B	S												T	T	T	T															T	T	B	S		T	T	T		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	Q	S	N	V	Q	Y	Y	L	S	V	L	N	Q	Q	L	P	I	E	S	Q	F	V	S	K	L	V	D	N	L	N	A	E	V	V	A	G	N	I	K	C	R	N	D	A	V	N	W	L	A	Y	T	Y	L	Y	V	R	M	L	A	S	P	M	L	Y	K	V	P	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T									T	S		S					T	T	G	G	G											T	T			S	S											S																S		T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	S	D	G	Q	L	K	K	F	R	E	S	L	V	H	S	A	L	C	I	L	K	E	Q	E	L	V	L	Y	D	A	E	N	D	V	I	E	A	T	D	L	G	N	I	A	S	S	F	Y	I	N	H	A	S	M	D	V	Y	N	R	E	L	D	E	H	T	T	Q	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	T	T	S																			T	S					S	S	S																T			S	T	T	T	T	T	T	G	G	G			T	T			S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	F	R	I	F	S	M	S	E	E	F	K	Y	V	S	V	R	Y	E	E	K	R	E	L	K	Q	L	L	E	K	A	P	I	P	I	R	E	D	I	D	D	P	L	A	K	V	N	V	L	L	Q	S	Y	F	S	Q	L	K	F	E	G	F	A	L	N	S	D	I	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	T									T	T	T												S	S				S		T	T	S	T														T				S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	I	H	Q	N	A	G	R	L	L	R	A	M	F	E	I	C	L	K	R	G	W	G	H	P	T	R	M	L	L	N	L	C	K	S	A	T	T	K	M	W	P	T	N	C	P	L	R	Q	F	K	T	C	P	V	E	V	I	K	R	L	E	A	S	T	V	P	W	G	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																						T	S		T	T	S		T	T	T	T		T	T											T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	L	Q	L	E	T	P	A	E	V	G	R	A	I	R	S	E	K	Y	G	K	Q	V	Y	D	L	L	K	R	F	P	K	M	S	V	T	C	N	A	Q	P	I	T	R	S	V	M	R	F	N	I	E	I	I	A	D	W	I	W	D	M	N	V	H	G	S	L	E	P	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T							T		G	G	G	S	S								T	S												S	S	S	S																T	T	T	S		S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	L	M	L	E	D	T	D	G	D	S	I	L	Y	Y	D	V	L	F	I	T	P	D	I	V	G	H	E	F	T	L	S	F	T	Y	E	L	K	Q	H	N	Q	N	N	L	P	P	N	F	F	L	T	L	I	S	E	N	W	W	H	S	E	F	E	I	P	V	S	F	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S													T	T	T	S	S																	S	S			S									S	S	S	T	T										S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	F	K	L	P	K	K	F	P	P	P	T	P	L	L	E	N	I	S	I	S	T	S	E	L	G	N	D	D	F	S	E	V	F	E	F	K	T	F	N	K	I	Q	S	Q	V	F	E	S	L	Y	N	S	N	D	S	V	F	V	G	S	G	K	G	T	G	K	T	A	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															G	G	G			B	S	T	T	S	S								S	S		S	B								T								S	S								T	T	S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	E	L	A	L	L	N	H	W	R	Q	N	K	G	R	A	V	Y	I	N	P	S	G	E	K	I	D	F	L	L	S	D	W	N	K	R	F	S	H	L	A	G	G	K	I	I	N	K	L	G	N	D	P	S	L	N	L	K	L	L	A	K	S	H	V	L	L	A	T	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T		S							S																			S	T	T									S		S	S	S									S	S					S	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	Q	F	E	L	L	S	R	R	W	R	Q	R	K	N	I	Q	S	L	E	L	M	I	Y	D	D	A	H	E	I	S	Q	G	V	Y	G	A	V	Y	E	T	L	I	S	R	M	I	F	I	A	T	Q	L	E	K	K	I	R	F	V	C	L	S	N	C	L	A	N	A	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T	T	T	T	S													S	G	G	G	G	G	S	S																					T													S		S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	F	G	E	W	A	G	M	T	K	S	N	I	Y	N	F	S	P	S	E	R	I	E	P	L	E	I	N	I	Q	S	F	K	D	V	E	H	I	S	F	N	F	S	M	L	Q	M	A	F	E	A	S	A	A	A	A	G	N	R	N	S	S	S	V	F	L	P	S	R	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T			B			S	S			S	S		B							B	S	S		S	S	S	S																			T	T								S	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	C	M	E	V	A	S	A	F	M	K	F	S	K	A	I	E	W	D	M	L	N	V	E	E	E	Q	I	V	P	Y	I	E	K	L	T	D	G	H	L	R	A	P	L	K	H	G	V	G	I	L	Y	K	G	M	A	S	N	D	E	R	I	V	K	R	L	Y	E	Y	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	G	G	G	S		S	S											S		S		S	T	T						T	T						S	S	S															T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	V	S	V	L	L	I	S	K	D	C	S	A	F	A	C	K	T	D	E	V	I	I	L	G	T	N	L	Y	D	G	A	E	H	K	Y	M	P	Y	T	I	N	E	L	L	E	M	V	G	L	A	S	G	N	D	S	M	A	G	K	V	L	I	L	T	S	H	N	M	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S						S	T	T	T	T	S				B	S							S		B			T	T	T		S		B												T	T	B				S	S	S		B							B
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	Y	Y	K	K	F	L	I	E	P	L	P	T	E	S	Y	L	Q	Y	I	I	H	D	T	L	N	N	E	I	A	N	S	I	I	Q	S	K	Q	D	C	V	D	W	F	T	Y	S	Y	F	Y	R	R	I	H	V	N	P	S	Y	Y	G	V	R	D	T	S	P	H	G	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S								T	T	T	T											T	T	S		S	S											S								T						T		S			S	S
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	V	F	L	S	N	L	V	E	T	C	L	N	D	L	V	E	S	S	F	I	E	I	S	T	L	S	N	G	L	I	A	S	H	Y	G	V	S	F	F	T	I	Q	S	F	V	S	S	L	S	N	T	S	T	L	K	N	M	L	Y	V	L	S	T	A	V	E	F	E	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	B	S	S	S	B		S								S																T	T												T		S	G	G	G	G
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	P	L	R	K	G	D	R	A	L	L	V	K	L	S	K	R	L	P	L	R	F	P	E	H	T	S	S	G	S	V	S	F	K	V	F	L	L	L	Q	A	Y	F	S	R	L	E	L	P	V	D	F	Q	N	D	L	K	D	I	L	E	K	V	V	P	L	I	N	V	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T											T	S	S	S				S	S	S		S	S	S															T																	T	T
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	D	I	L	S	A	N	G	Y	L	N	A	T	T	A	M	D	L	A	Q	M	L	I	Q	G	V	W	D	V	D	N	P	L	R	Q	I	P	H	F	N	N	K	I	L	E	K	C	K	E	I	N	V	E	T	V	Y	D	I	M	A	L	E	D	E	E	R	D	E	I	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		T	T														T					S		G	G	G	S	S	T	T		T											T			S						T
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750
Sequence	L	T	D	S	Q	L	A	Q	V	A	A	F	V	N	N	Y	P	N	V	E	L	T	Y	S	L	N	N	S	D	S	L	I	S	G	V	K	Q	K	I	T	I	Q	L	T	R	D	V	E	P	E	N	L	Q	V	T	S	E	K	Y	P	F	D	K	L	E	S	W	W	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S										S	S		S	S				S	S											S	S			S			B				S	S			S			B
	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.
Sequence	L	G	E	V	S	K	K	E	L	Y	A	I	K	K	V	T	L	N	K	E	T	Q	Q	Y	E	L	E	F	D	T	P	T	S	G	K	H	N	L	T	I	W	C	V	C	D	S	Y	L	D	A	D	K	E	L	S	F	E	I	N	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T												S	S												S	S	S		B									T	T	S	S	S									B