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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lp8A_

Fold library idPDB HeaderMoleculeTitle
c5lp8A_2.70PDB header: ligaseChain: A: PDB Molecule: e3 ubiquitin-protein ligase huwe1;


Added to library: Tue Feb 28 11:19:07 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DYDIPTFQGADTQKFLRFAETHRTVLNQILRQSTTHLADGPFAVLVDYIRVLDFDVKRKYFRQELERLDE
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Known secondary structure (DSSP)







TS

TT

TTS
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYAL
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Known secondary structure (DSSP) T




TTSTTS
TSTT




TT
GGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence FRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESED
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Known secondary structure (DSSP)
TTTSS

TTGGGSTTTT





B
T



GGGGGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YHFYQGLVYLLENDVSTLGYDLTFSTEVQEFGVCEVRDLKPNGANILVTEENKKEYVHLVCQMRMTGAIR
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Known secondary structure (DSSP) S
GGGSSS

BSTTSSTTGGG
B

TTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQ
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Known secondary structure (DSSP) S
TTS






TSS
TT
TS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ADRAKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHML
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Known secondary structure (DSSP) SSS


TT
GGG
TT


S
TTS

TTTT

S
 .........430..
Sequence LLAIQECSEGFG
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Known secondary structure (DSSP) TS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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