PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5loyD_

Fold library id	PDB Header	Molecule	Title
c5loyD_	2.50	PDB header: hydrolase	Chain: D: PDB Molecule: designed anbu protein;

Links to external resources
Added to library: Sat Jun 10 08:25:00 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T Y C V G I R L D E G L V F A S D S R T N A G V D N I S T F R K M H V F E V P G E R V I V L L T A G N L A T T Q A V I S L L E E R L K D P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T
T T T
T
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E R L L T A P S M F E A A R L V G E A L R E V Q A R D F N A S F I L G G Q I A G E P P R L F L I Y P A G N F I E A T P D T P F F Q I G E T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G
S S T
T T S
T T S
S S S
S
G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y G K P I L D R V I T P D T S L E D A A K C A L V S F D S T M R S N L S V G L P L D L L V Y E R D S L R V G H R R R I D E D D P Y F R M L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
T T
T T
S
T T
S
T T

. . . . . . . . . 220 . . . . . . . . .

Sequence K Q W S E G L R Q A F D S L P D P P W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	Y	C	V	G	I	R	L	D	E	G	L	V	F	A	S	D	S	R	T	N	A	G	V	D	N	I	S	T	F	R	K	M	H	V	F	E	V	P	G	E	R	V	I	V	L	L	T	A	G	N	L	A	T	T	Q	A	V	I	S	L	L	E	E	R	L	K	D	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T													S	T	T														T	T	T																						T		S	S			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	R	L	L	T	A	P	S	M	F	E	A	A	R	L	V	G	E	A	L	R	E	V	Q	A	R	D	F	N	A	S	F	I	L	G	G	Q	I	A	G	E	P	P	R	L	F	L	I	Y	P	A	G	N	F	I	E	A	T	P	D	T	P	F	F	Q	I	G	E	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	G	G	G		S	S																	T														T	T	S									T	T	S							S	S	S							S		G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	G	K	P	I	L	D	R	V	I	T	P	D	T	S	L	E	D	A	A	K	C	A	L	V	S	F	D	S	T	M	R	S	N	L	S	V	G	L	P	L	D	L	L	V	Y	E	R	D	S	L	R	V	G	H	R	R	R	I	D	E	D	D	P	Y	F	R	M	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G										T	T																						T	T			S									T	T			S									T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Sequence	K	Q	W	S	E	G	L	R	Q	A	F	D	S	L	P	D	P	P	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S