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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lopA_

Fold library idPDB HeaderMoleculeTitle
c5lopA_3.50PDB header: rna binding proteinChain: A: PDB Molecule: klla0f23980p;


Added to library: Thu Feb 9 19:35:30 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLPLLRPFETVSLENAVEDLVVRFILNVPPEDLSTVERVLFHFEEASWFYTDFVKLMNPYLPNLSIKSFS
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Known secondary structure (DSSP)





TTSS


TTSSS
GGGSSSTTT
TTS



 .........80.........90.........100.........110.........120.........130.........140
Sequence KIVIDICPLIWNWDITPENALVKFSNYKKTIPVRGAAIFNDSLSKILLLRGINSKHWSFPRGKIGKDEDD
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Known secondary structure (DSSP)
TTS

SSS
TTS
TT
S
TT



B
S

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VACCIREVKEETGFDLTGFIDADQYVERNMNGKNFKIFLVKGVPEDFEFKPEHKNEIQAIEWKDFKKLSK
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Known secondary structure (DSSP) S


GGG

SS
SSS

SSS



SSTTT

 .........220.........230.........240.........250.........
Sequence AITKNEGFLVNSMIRPLSLYVKNEKRAKDENKLKLYAEEHLKSILGLNK
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Known secondary structure (DSSP) TT



GGGTST




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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