PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5lnk2_

Fold library id	PDB Header	Molecule	Title
c5lnk2_	3.90	PDB header: oxidoreductase	Chain: 2: PDB Molecule: mitochondrial complex i, 24 kda subunit;

Links to external resources
Added to library: Thu Feb 9 16:11:40 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G G A L F V H R D T P K N N P E T P F D F T P E N Y K R I E A I V K N Y P E G H K A A A V L P V L D L A Q R Q N G W L P I S A M N K V A E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S S
S S
T T S
T T T
G G G S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L Q V P P M R V Y E V A T F Y T M Y N R K P V G K Y H I Q V C T T T P C M L R N S D S I L E A I Q K K L G I K V G E T T P D K L F T L I E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
S S
S
S S T T T
T T
S S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E C L G A C V N A P M V Q I N D N Y Y E D L T P K D I E E I I D E L K A G K I P K P G P R S G R F S C E P A G G L T S L T E P P K G P G F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S S S S
T T
B
S
T
S
S S
T T S
T T T
S
S
S
S

. . . .

Sequence V Q A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	G	A	L	F	V	H	R	D	T	P	K	N	N	P	E	T	P	F	D	F	T	P	E	N	Y	K	R	I	E	A	I	V	K	N	Y	P	E	G	H	K	A	A	A	V	L	P	V	L	D	L	A	Q	R	Q	N	G	W	L	P	I	S	A	M	N	K	V	A	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S						S	S		S	S																		T	T	S		T	T	T		G	G	G												S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	Q	V	P	P	M	R	V	Y	E	V	A	T	F	Y	T	M	Y	N	R	K	P	V	G	K	Y	H	I	Q	V	C	T	T	T	P	C	M	L	R	N	S	D	S	I	L	E	A	I	Q	K	K	L	G	I	K	V	G	E	T	T	P	D	K	L	F	T	L	I	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T													S	S	S			S	S				S								S	S					T	T													T			T	T				S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	C	L	G	A	C	V	N	A	P	M	V	Q	I	N	D	N	Y	Y	E	D	L	T	P	K	D	I	E	E	I	I	D	E	L	K	A	G	K	I	P	K	P	G	P	R	S	G	R	F	S	C	E	P	A	G	G	L	T	S	L	T	E	P	P	K	G	P	G	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S			S	S	S	S					T	T			B		S																T						S			S	S		T	T	S			T	T	T			S			S					S		S
	.	.	.	.
Sequence	V	Q	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T