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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ln3C_

Fold library idPDB HeaderMoleculeTitle
c5ln3C_6.80PDB header: hydrolaseChain: C: PDB Molecule: proteasome subunit alpha type-4;


Added to library: Sat Mar 25 08:57:11 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNE
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Known secondary structure (DSSP)




S


S


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SSS

S
S
SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWD
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Known secondary structure (DSSP) S
S
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S
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 .........150.........160.........170.........180.........190.........200.........210
Sequence KHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEK
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Known secondary structure (DSSP) SSS


TTS

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SS


GGG
 .........220.........230.........240.........250.........260.
Sequence VEIATLTRENGKTVIRVLKQKEVEQLIKKHEEEEAKAEREKKEKEQKEKDK
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Known secondary structure (DSSP)
SSSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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