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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lm4A_

Fold library idPDB HeaderMoleculeTitle
c5lm4A_3.10PDB header: transport proteinChain: A: PDB Molecule: excitatory amino acid transporter 1,neutral amino acid


Added to library: Sat Apr 22 08:25:37 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EDVKSFLRRNALLLLTVLAVILGVVLGFLLRPYPLSPREVKYFAFPGELLMRMLKMLILPLIVSSLITGL
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Known secondary structure (DSSP)
TTTTS


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence ASLDAKASGRLGMRAVVYYMSTTIIAVVLGIILVLIIEVLDCFLDLARNIFPSNLVSAAFRSYSTQEVEG
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Known secondary structure (DSSP) SS
TT

S
S
TT


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence MNILGLVVFSIVFGIALGKMGEQGQLLVDFFNSLNEATMKLVAIIMWYAPLGILFLIAGKIVEGMYMVTV
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Known secondary structure (DSSP)

TTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence IVGLVIHGLIVLPLIYFLITRKNPFVFIAGILQALITALGTSSSSATLPITFKCLEENNGVDKRITRFVL
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Known secondary structure (DSSP) T
S
T

TTTSTTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence PVGATINMDGTALYEAVAAIFIAQDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTAVGLPTDDITL
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Known secondary structure (DSSP) T



S
SSTTTT

GGG
 .........360.........370.........380.........390
Sequence IIAVDWLLDRFRTMVNVLGDALGAGIVEHLSRKELEKQDD
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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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