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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lj3T_

Fold library idPDB HeaderMoleculeTitle
c5lj3T_3.80PDB header: splicingChain: T: PDB Molecule: syf1;


Added to library: Thu Feb 9 14:27:59 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DEDVAFEYEIQKTPQNILTWKRYIEYWKDKQIRWLYERFCSQFVTDTSIWEDYIRWESETSRIFWLFQRC
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Known secondary structure (DSSP)
S

SS

S




 .........80.........90.........100.........110.........120.........130.........140
Sequence LKSCVRDCDRICLSYLELAIEMIRHALASSLMKMEMHRKVWDPVIKFVEEKVESTDEAELINVLLVKGFT
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Known secondary structure (DSSP) SS

TT








 .........150.........160.........170.........180.........190.........200.........210
Sequence IWSSHILERYQQKRNESLATLALTRNITIKSVYEKYLLNFNYLASLEKLGDNQYEEFMRQMNGPDKWLFL
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 .........220.........230.........240.........250.........260.........270.........280
Sequence ILSLAKYYIGRLDSCGDLLKKSLQQFDRIYNFYLLFEQECSQFILGKLKENDDWTEKLQAHMATFESLIN
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 .........290.........300.........310.........320.........330.........340.........350
Sequence LYDIYLNDVALRQDSLVETWMKRVSLQKSAAEKCNVYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSN
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Known secondary structure (DSSP) T




SS


S
TSS
SS



 .........360.........370.........380.........390.........400.........410.........420
Sequence AISTARKLWTQSLKVPYPYIEDLEEIYLNWADRELDHVPTNPEILLSLRIWSKYIDYLEAYIFNKTKMAY
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Known secondary structure (DSSP) S


SSS
S

TT



 .........430.........440.........450.........460.........470.........480.........490
Sequence NTVIDLRPAMAENFALFLQNYEVMESFQVYEKTIPLFPPEIQYELWIEYLEVATSHPEHIRFLFEKALKN
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S

 .........500.........510.........520.........530.........540.........550.........560
Sequence LCSNGIDCKTIFIAYSVFEERSKSIEILRRGAVIGLESRLQLWRMCISKAESVTRELYQECIQILEFVIK
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Known secondary structure (DSSP) TSS
SSS








 .........570.........580.........590..
Sequence FSDFESRAREILAYGAKLNTELWDSFEIFELK
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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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