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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lj3M_

Fold library idPDB HeaderMoleculeTitle
c5lj3M_3.80PDB header: splicingChain: M: PDB Molecule: cwc2;


Added to library: Thu Feb 9 11:39:41 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSGKTRGDNDGQLFF
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Known secondary structure (DSSP)

S



S
TTSS

S



SSTTTTS


S





S




B

T

SB
 .........80.........90.........100.........110.........120.........130.........140
Sequence CLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEALDCFGREKFADYREDMGGIGSFRKKNKTLYVGGI
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Known secondary structure (DSSP)
T

TTGGG
SSBBS


TTTGGGTB
TTS
B
BSS

TT

SS
BSSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence DGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFAKEAMSNQTLLLPSDKEW
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Known secondary structure (DSSP) TTS



S
TTTTSSTT




TTSTTS
 .........220.........230.........240.........250..
Sequence DDRREGTGLLVKWANEDPDPAAQKRLQEELKLESLNMMVHLI
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Known secondary structure (DSSP) TTSSSS







S


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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