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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5li2C_

Fold library idPDB HeaderMoleculeTitle
c5li2C_6.20PDB header: viral proteinChain: C: PDB Molecule: tail sheath protein;


Added to library: Sat Jul 22 08:20:22 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSEKVFCLIGQAEGGEPNTVYELRNYSQAKRLFRSGELLDAIELAWGSNPNYTAGRILAMRIELKITSKI
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Known secondary structure (DSSP)





SS

BS



S
S

TTTTTTTT
S




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence YGNVANNIQVGLEKNTLSDSLRLRVIFQDDRFNEVYDNIGNIFTATFSVEHDEETQKASRLVLKVGDQEV
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Known secondary structure (DSSP) S

TT
SSS
SS




TT
SS


SS
TT
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence KSYDLTGGAYDYTAVYVKAVFGDLEKQTAYNGIVSFEQLNAEGEVPSNVEVEAGEETWADKLDKFAHEGG
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TTSSTT


TT



BTT







 .........220.........230.........240.........250.........260.........270.........280
Sequence YYIVPLSSKQSVHAEVASFVKEREPMRAIVGGGFNESKEQLFGRQASLSNPRVSLVANSGTFVMDDGRNH
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Known secondary structure (DSSP)

B





SS





TT




TT
S

BTTTTB
 .........290.........300.........310.........320.........330.........340.........350
Sequence VPAYMVAVALGGLASGLEIGESITFKPLRVSYESIDLDELNENGIISIEFVRNRTNTFFMAVGEANDFLV
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Known secondary structure (DSSP)

SSS





SS
S
BS


TTTT
SSSS



 .........360.........370.........380.........390.........400.........410.........420
Sequence SELKVQLEQFIGTRTINTSASIIKDFIQSYLGRKKRDNEIQDFPAEDVQVIVEGNEARISMTVYPIRSFK
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Known secondary structure (DSSP) TTS

SSSB





SS
SSS


S


BSSSS
 .......
Sequence KISVSLV
Predicted secondary structure

SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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