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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lfcA_

Fold library idPDB HeaderMoleculeTitle
c5lfcA_3.20PDB header: transferaseChain: A: PDB Molecule: dsrv;


Added to library: Sat Oct 14 08:24:08 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DNNKTQYFGPDGAQVKGAFQQVNKNIYFDAQTGYARQNVGFLDGTAKGFDEQGNQIKSGIATDLSGNVYY
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Known secondary structure (DSSP)

S





SSS


TTS





SSS



SSSTT
TT
SB

SS
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence FDASGKMLTGVQNIDGKKYYFDEQGHRRRNYAGVFNNEFIYFGLDGVGQSAIEYQFEKGLTSQNSVATSH
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Known secondary structure (DSSP) B
TTS
B

SSS

TT

SS
SS

TTSBSSS

S
B


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NAAKSYDTKSFTNVDGFLTANSWYRPTDILRNGTKWEPSTETDFRPLLMTWWPDKEVQANYLNYMSALGL
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Known secondary structure (DSSP) SBS
SSGGGB

BTTB
BTT

BSTTT

TT

GGGT

SSTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GDQKIYTGASSQLDLNNAALIVQEAIEKKISLEKSTKWLDDSIKSFIKSKRKDIQGNLVDTNPGWTIDSE
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Known secondary structure (DSSP) S
SS


TTS
T
ST


SSS

S
GGGSGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence TGSTNHLQNGAFIFTNSPLVPEANAAEGNRLINRTPSQQTGNHISYASQPYSGDDWGYELLLGNDVDNSN
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Known secondary structure (DSSP)
S


STTS



TT
TTS


TT






GGGTTSS





TTS






S

SS
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence PIVQAEQLNWIHYLMNFGTITAPQDPDAHLANFDSIRIDAVDNVDADLLQIAGDYFKAAYQVGENDKNAN
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Known secondary structure (DSSP) T
TTSTTGGGG




GGGS
T
TTS
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence QHIHILEDWSPNDVWYNQQVNGNSQLTMDATMQNQLLASLTRPITSRDSMKSFTKDALLVHRTADNSYNQ
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Known secondary structure (DSSP) TS




STTSTTSSBTTS
GGG


GGGGG
SSSSS

SS


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence AVPNYSFIRAHDSEVQTIIAKIISDKHPDLYPTVDKALLAKDSALYDEAFTEYNADMQKISSQKQYTHNN
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Known secondary structure (DSSP) S

S

SSTTT
TTT

STT


S
GGG
SSS
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence MPSAYAILLTNKDTVPRVYYGDLFTDNGEYMANKTPYYDAITSLLTARTKFVSGGQSLSVDKNDVLTSVR
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Known secondary structure (DSSP)
SS
B
SSBSTT
SB
TT

S

TT

 .........640.........650.........660.........670.........680.........690.........700
Sequence YGKGALSATDNGSSDTRNQGIGVIVSNNPNLDLNNDKVTLSMGISHAHQAYRPLLLTNSQGIVAYATDSE
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Known secondary structure (DSSP)

TT

STT



TTTTT





TT


TT



GGGSS

SS


SGGG
 .........710.........720.........730.........740.........750.........760.........770
Sequence VPQNLYKTTNDKGELTFDASEIKGYDTVQTSGYLAVWVPVGASDEQDARTIASTEKNNGNSVYHSNAALD
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Known secondary structure (DSSP) S
TTT


TTS
TTT



BSSS
BS
TT

SS








S

SSS
SS

S
 .........780.........790.........800.........810.........820.........830.........840
Sequence SQLIYEGFSNFQTVPSKNASADEYANVIIAKHAADFNKWGVTSFQMAPQYRSSTDGSFLDAVDTVQNGYA
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Known secondary structure (DSSP) T




TTB



TT

GGGSTTT
S



S
B

S
SSGGGSTT


SSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence FTDRYDLGFNAADGSKNPTKYGTDEDLRNAIKSLHAQKTYDGSSIQVMADFVPDQLYNMPLEQAVSVIRT
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Known secondary structure (DSSP) BS
TT
SS


TT





SS

SB
TTS
B


S


S
 .........920.........930.........940.........950.........960.........970.........980
Sequence DKYGVNSENPDIQNIIYAANIKSSGTDYQSIYGGKYLAELQKNPLFKSLFDRIQISTKKTIDPNTRITQW
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Known secondary structure (DSSP)
TT

B


GGG

SSSTTTT
GGG
B
TTTSSB

TTS

SS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence SAKYFNGSNIQGKGINYVLKDWASNKYFNVSSNDDMYSRLPKQLMNQESNTGFIVDDIGVKYYSISGYQA
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Known secondary structure (DSSP)
GGG


S
GGGB
TTTTBBSS


TTSB


SGGGT



SS

TTS
B
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence KNTFVEDGNGEWYYFDNDGYMVKSTEESGPLRTVNASSKKYYILPNGVEIRNSFGQDIQGNTYYFDARGE
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Known secondary structure (DSSP)
S
TTS

TTS
B



SSS
S
SSSS
B
TTS
-

-

SS



TTS
 .........1130.........1140........
Sequence MVTSQYISDDTQNIYYFNNDGTMAKKGG
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Known secondary structure (DSSP) B

S
TTS

TTS
B





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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